RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 Q9H8V8 135 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 SDF2L1Q9HCN8 221 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 PRO0255Q9UI72 69 aa11.66□□□□□ -0.54
NOTCH3-205ENST00000600841 IGHV3-16A0A0C4DH30 117 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 A0A0D9SG52 128 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 A0A1B0GVY2 172 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 KANTRA0A1W2PQU2 76 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 IFNA7P01567 189 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 FGF8P55075 233 aaPredicted RBP11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 FLI1Q01543 452 aaPredicted RBP11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 ZNF345Q14585 488 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 ZFP69Q49AA0 526 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 TMEM75Q8N9X5 138 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 ICOSQ9Y6W8 199 aa11.65□□□□□ -0.54
NOTCH3-205ENST00000600841 TRGV4A0A0C4DH28 118 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 M0R2P5 195 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 PFDN1O60925 122 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 GCGP01275 180 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 TYMSP04818 313 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 UBE2G2P60604 165 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 FHL2Q14192 279 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 AKAP14Q86UN6 197 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 TCTE3Q8IZS6 198 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 UPK3BQ9BT76 320 aa11.64□□□□□ -0.55
NOTCH3-205ENST00000600841 MAP1LC3B2A6NCE7 125 aa11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 ZNF80P51504 273 aaPredicted RBP11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 CRYBA4P53673 196 aa11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 SMUG1Q53HV7 270 aa11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 SAPCD1Q5SSQ6 148 aa11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 ZNF471Q9BX82 626 aaPredicted RBP11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 NKX6-2Q9C056 277 aaPredicted RBP11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 MAP1LC3BQ9GZQ8 125 aa11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 PKD1P98161 4303 aa11.63□□□□□ -0.55
NOTCH3-205ENST00000600841 FAM74A7A6NL05 159 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 BCL2L11O43521 198 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 PFN1P07737 140 aaKnown RBP11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 SFTA3P0C7M3 94 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 PPT1P50897 306 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 TMUB2Q71RG4 321 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 C6orf223Q8N319 242 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 ZNF479Q96JC4 524 aa11.62□□□□□ -0.55
NOTCH3-205ENST00000600841 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
NOTCH3-205ENST00000600841 TRAV34A0A0B4J273 112 aa11.61□□□□□ -0.55
NOTCH3-205ENST00000600841 PEX7O00628 323 aa11.61□□□□□ -0.55
NOTCH3-205ENST00000600841 OR4C5Q8NGB2 326 aa11.61□□□□□ -0.55
NOTCH3-205ENST00000600841 STOML3Q8TAV4 291 aa11.61□□□□□ -0.55
NOTCH3-205ENST00000600841 LINC00479Q96M42 142 aa11.61□□□□□ -0.55
NOTCH3-205ENST00000600841 C11orf21Q9P2W6 132 aa11.61□□□□□ -0.55
NOTCH3-205ENST00000600841 C1QBP02746 253 aa11.6□□□□□ -0.55
NOTCH3-205ENST00000600841 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
NOTCH3-205ENST00000600841 HIST1H2BAQ96A08 127 aa11.6□□□□□ -0.55
NOTCH3-205ENST00000600841 HERC2O95714 4834 aa11.6□□□□□ -0.55
NOTCH3-205ENST00000600841 A0A1B0GVG6 124 aa11.59□□□□□ -0.55
NOTCH3-205ENST00000600841 EIF5AP63241 154 aaKnown RBP11.59□□□□□ -0.55
NOTCH3-205ENST00000600841 PCNPQ8WW12 178 aaKnown RBP11.59□□□□□ -0.55
NOTCH3-205ENST00000600841 ARL2-SNX15V9GYD0 113 aa11.59□□□□□ -0.55
NOTCH3-205ENST00000600841 DYNC1H1Q14204 4646 aaKnown RBP11.58□□□□□ -0.56
NOTCH3-205ENST00000600841 KIAA1109Q2LD37 5005 aa11.58□□□□□ -0.56
NOTCH3-205ENST00000600841 UMAD1C9J7I0 102 aa11.58□□□□□ -0.56
NOTCH3-205ENST00000600841 SEC11BP0C7V7 166 aa11.58□□□□□ -0.56
NOTCH3-205ENST00000600841 FHITP49789 147 aa11.58□□□□□ -0.56
NOTCH3-205ENST00000600841 Q86TA4 180 aa11.58□□□□□ -0.56
NOTCH3-205ENST00000600841 DNAH11Q96DT5 4516 aa11.58□□□□□ -0.56
NOTCH3-205ENST00000600841 A0A1W2PPQ1 181 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 C9JCJ5 164 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 ORM1P02763 201 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 GYPEP15421 78 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 SRIP30626 198 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 LGALSLQ3ZCW2 172 aaPredicted RBP11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 ZNF876PQ49A33 203 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 CST9LP1Q5W188 147 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 NEGR1Q7Z3B1 354 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 FAM213BQ8TBF2 198 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 TCEAL7Q9BRU2 100 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 KRTAP1-5Q9BYS1 174 aa11.57□□□□□ -0.56
NOTCH3-205ENST00000600841 K7EQD1 137 aa11.56□□□□□ -0.56
NOTCH3-205ENST00000600841 SIVA1O15304 175 aa11.56□□□□□ -0.56
NOTCH3-205ENST00000600841 NXPH4O95158 308 aa11.56□□□□□ -0.56
NOTCH3-205ENST00000600841 TPT1P13693 172 aaKnown RBP11.56□□□□□ -0.56
NOTCH3-205ENST00000600841 LYPD5Q6UWN5 251 aa11.56□□□□□ -0.56
NOTCH3-205ENST00000600841 SFT2D1Q8WV19 159 aa11.56□□□□□ -0.56
NOTCH3-205ENST00000600841 C9orf85Q96MD7 179 aa11.56□□□□□ -0.56
NOTCH3-205ENST00000600841 FABP5P3A8MUU1 101 aa11.55□□□□□ -0.56
NOTCH3-205ENST00000600841 TNP2Q05952 138 aa11.55□□□□□ -0.56
NOTCH3-205ENST00000600841 FMC1Q96HJ9 113 aa11.55□□□□□ -0.56
NOTCH3-205ENST00000600841 TXNDC17Q9BRA2 123 aa11.55□□□□□ -0.56
NOTCH3-205ENST00000600841 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
NOTCH3-205ENST00000600841 BTF3P20290 206 aaKnown RBP11.54□□□□□ -0.56
NOTCH3-205ENST00000600841 UBE2G1P62253 170 aa11.54□□□□□ -0.56
NOTCH3-205ENST00000600841 DPPA3Q6W0C5 159 aa11.54□□□□□ -0.56
NOTCH3-205ENST00000600841 MBD3L1Q8WWY6 194 aa11.54□□□□□ -0.56
NOTCH3-205ENST00000600841 PTH2Q96A98 100 aa11.54□□□□□ -0.56
NOTCH3-205ENST00000600841 IGKV3D-20A0A0C4DH25 116 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms