RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 RPS20P60866 119 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 LINC00482Q8N8I6 264 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 MIEN1Q9BRT3 115 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 GOLT1BQ9Y3E0 138 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 SETXQ7Z333 2677 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 LINC00614P0C842 121 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 DEFB131AP59861 70 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 GDF5OSQ5U4N7 250 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 TMEM208Q9BTX3 173 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 ZNF256Q9Y2P7 627 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 NUPR1O60356 82 aa13.15□□□□□ -0.3
SHKBP1-224ENST00000600718 CD33P20138 364 aa13.15□□□□□ -0.3
SHKBP1-224ENST00000600718 ZNF705AQ6ZN79 300 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-224ENST00000600718 APRG1Q8IVJ8 170 aa13.15□□□□□ -0.3
SHKBP1-224ENST00000600718 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
SHKBP1-224ENST00000600718 GPX1P07203 203 aa13.14□□□□□ -0.31
SHKBP1-224ENST00000600718 COX19Q49B96 90 aa13.14□□□□□ -0.31
SHKBP1-224ENST00000600718 SPINK4O60575 86 aa13.14□□□□□ -0.31
SHKBP1-224ENST00000600718 ORM1P02763 201 aa13.14□□□□□ -0.31
SHKBP1-224ENST00000600718 LINC01559Q495D7 138 aa13.14□□□□□ -0.31
SHKBP1-224ENST00000600718 C2CD3Q4AC94 2353 aa13.13□□□□□ -0.31
SHKBP1-224ENST00000600718 LEPP41159 167 aa13.13□□□□□ -0.31
SHKBP1-224ENST00000600718 KRTAP24-1Q3LI83 254 aa13.13□□□□□ -0.31
SHKBP1-224ENST00000600718 Q6AWC8 147 aa13.13□□□□□ -0.31
SHKBP1-224ENST00000600718 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
SHKBP1-224ENST00000600718 TRAV21A0A0B4J279 112 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 CMC4P56277 68 aaPredicted RBP13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 PRR9Q5T870 116 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 RASL11AQ6T310 242 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 ATP5L2Q7Z4Y8 100 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 PGLYRP4Q96LB8 373 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 MRPL54Q6P161 138 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 WDR73Q6P4I2 378 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 Q6ZWC4 215 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 GNB1LQ9BYB4 327 aa13.12□□□□□ -0.31
SHKBP1-224ENST00000600718 TMSB15BA0A087X1C1 80 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 KLLNB2CW77 178 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 HLA-DRB4P13762 266 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 TSPOP30536 169 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 RNASE4P34096 147 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 TP53TG3Q9ULZ0 132 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 HLA-DRB4X5D2U9 266 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 J3KRW8 73 aa13.11□□□□□ -0.31
SHKBP1-224ENST00000600718 A8MTW9 85 aa13.1□□□□□ -0.31
SHKBP1-224ENST00000600718 Q0VG73 95 aa13.1□□□□□ -0.31
SHKBP1-224ENST00000600718 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
SHKBP1-224ENST00000600718 C11orf21Q9P2W6 132 aa13.1□□□□□ -0.31
SHKBP1-224ENST00000600718 IGKV3D-20A0A0C4DH25 116 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 H3BMM0 161 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 IGKV3-20P01619 116 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 FRMD6-AS1P0C7T7 363 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 LINC00310P59036 64 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 VAMP8Q9BV40 100 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 A0A1B0GXF2 115 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 GRIFINA4D1Z8 144 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 MT-ND6P03923 174 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 NPSP0C0P6 89 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 PRIMA1Q86XR5 153 aa13.09□□□□□ -0.31
SHKBP1-224ENST00000600718 A0A1B0GUT8 65 aa13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 CDKN1BP46527 198 aa13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 INSL3P51460 131 aa13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 ODF3L2Q3SX64 289 aa13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 AMTNQ6UX39 209 aa13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 BORCS7Q96B45 105 aa13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 MRPL18Q9H0U6 180 aaKnown RBP13.08□□□□□ -0.32
SHKBP1-224ENST00000600718 OR11H12B2RN74 326 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 SERF1AO75920 110 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 IGLC6P0CF74 106 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 PCP4P48539 62 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 HBBP68871 147 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 RIGQ13278 110 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 KIR3DS1Q14943 382 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 Q6ZQT7 251 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 FER1L6-AS1Q8NA97 138 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 ZNF747Q9BV97 191 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 C7orf71A4D174 169 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 HLA-DQA1P01909 254 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 LYZL1Q6UWQ5 148 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 CLUHP3Q96NS8 147 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 FAM110AQ9BQ89 295 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
SHKBP1-224ENST00000600718 A0A1B0GW15 77 aa13.06□□□□□ -0.32
SHKBP1-224ENST00000600718 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
SHKBP1-224ENST00000600718 COL5A1-AS1Q5SY13 56 aa13.06□□□□□ -0.32
SHKBP1-224ENST00000600718 C9orf66Q5T8R8 295 aa13.06□□□□□ -0.32
SHKBP1-224ENST00000600718 SETD2Q9BYW2 2564 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-224ENST00000600718 F2Z2F3 143 aa13.05□□□□□ -0.32
SHKBP1-224ENST00000600718 CAMPP49913 170 aa13.05□□□□□ -0.32
SHKBP1-224ENST00000600718 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
SHKBP1-224ENST00000600718 PAM16Q9Y3D7 125 aa13.05□□□□□ -0.32
SHKBP1-224ENST00000600718 M0R2Z0 102 aa13.05□□□□□ -0.32
SHKBP1-224ENST00000600718 ARMS2P0C7Q2 107 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms