RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GAGE12IP0CL82 117 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 FGF8P55075 233 aaPredicted RBP6.11□□□□□ -1.43
SSBP4-208ENST00000600628 FAM3BP58499 235 aaPredicted RBP6.11□□□□□ -1.43
SSBP4-208ENST00000600628 IFITM2Q01629 132 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 IQCF2Q8IXL9 164 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 LINC00479Q96M42 142 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 SPXQ9BT56 116 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 ZNF471Q9BX82 626 aaPredicted RBP6.11□□□□□ -1.43
SSBP4-208ENST00000600628 PSG8Q9UQ74 426 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 KANTRA0A1W2PQU2 76 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 PEX7O00628 323 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 TYMSP04818 313 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 PFN1P07737 140 aaKnown RBP6.1□□□□□ -1.43
SSBP4-208ENST00000600628 DNLZQ5SXM8 178 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 UBE2DNLQ8IWF7 75 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 ZNRF2Q8NHG8 242 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 PTH2Q96A98 100 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 C8orf49Q96NF6 230 aa6.1□□□□□ -1.43
SSBP4-208ENST00000600628 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 F6UZH7 168 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 K7EQM0 130 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 GNRH2O43555 120 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 LTAP01374 205 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 RNASE3P12724 160 aaKnown RBP6.09□□□□□ -1.43
SSBP4-208ENST00000600628 CRIP1P50238 77 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 EIF5AP63241 154 aaKnown RBP6.09□□□□□ -1.43
SSBP4-208ENST00000600628 ZNF415Q09FC8 603 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 FHL2Q14192 279 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 TMEM183BQ1AE95 376 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 SMUG1Q53HV7 270 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 MUC21Q5SSG8 566 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 SAPCD1Q5SSQ6 148 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 FAM159AQ6UWV7 190 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 Q86TA4 180 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 TMEM183AQ8IXX5 376 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 KCNS1Q96KK3 526 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 SGK494Q96LW2 274 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 C9orf85Q96MD7 179 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 MLST8Q9BVC4 326 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 RPH3ALQ9UNE2 315 aa6.09□□□□□ -1.43
SSBP4-208ENST00000600628 DNAH5Q8TE73 4624 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 TRGV1A0A0A0MS02 117 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 TRAV34A0A0B4J273 112 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 IGKV3D-20A0A0C4DH25 116 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 M0R2N4 97 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 NUDT3O95989 172 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 GCGP01275 180 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 IFNA7P01567 189 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 TPT1P13693 172 aaKnown RBP6.08□□□□□ -1.44
SSBP4-208ENST00000600628 SULT1A2P50226 295 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 RAB5CP51148 216 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 UBE2G2P60604 165 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 OR5I1Q13606 314 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 ZNF674Q2M3X9 581 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 PIK3CD-AS1Q5SR53 167 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 SLC51BQ86UW2 128 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 C9orf62Q8N4C0 152 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 UPK3BQ9BT76 320 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 ZFP30Q9Y2G7 519 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 LINC00588Q9Y4M8 146 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
SSBP4-208ENST00000600628 IGLV2-18A0A075B6J9 118 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 A0A096LPF7 62 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 M0R2P5 195 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 RTL8CO15255 209 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 PAGE4O60829 102 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 H2AFB1P0C5Y9 115 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 CRYBA4P53673 196 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 CCL20P78556 96 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 ESRGQ1W209 222 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 LINC00336Q6ZUF6 198 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 PRNTQ86SH4 94 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 SLC7A5P1Q8MH63 180 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 FAM213BQ8TBF2 198 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 SFT2D1Q8WV19 159 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 C11orf52Q96A22 123 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 ZC2HC1AQ96GY0 325 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 FMC1Q96HJ9 113 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 NDFIP1Q9BT67 221 aa6.07□□□□□ -1.44
SSBP4-208ENST00000600628 MRPL16Q9NX20 251 aaKnown RBP6.07□□□□□ -1.44
SSBP4-208ENST00000600628 TRGV2A0A075B6R0 118 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 TRAV4A0A0B4J268 109 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 A0A1B0GVY2 172 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 FABP5P3A8MUU1 101 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 CCL18P55774 89 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 RAB14P61106 215 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 SLAQ13239 276 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 LYPD6BQ8NI32 183 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 ZNF479Q96JC4 524 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 SCRT2Q9NQ03 307 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 PRO0255Q9UI72 69 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 BOLA1Q9Y3E2 137 aa6.06□□□□□ -1.44
SSBP4-208ENST00000600628 A0A0J9YY99 117 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 KRBOX1C9JBD0 128 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 S100A9P06702 114 aaKnown RBP6.05□□□□□ -1.44
SSBP4-208ENST00000600628 PPT1P50897 306 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 LINC01559Q495D7 138 aa6.05□□□□□ -1.44
SSBP4-208ENST00000600628 UFSP1Q6NVU6 142 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms