RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 MUC21Q5SSG8 566 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 TMEM78Q5T7P6 136 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 C1orf134Q5TEV5 83 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 SSX7Q7RTT5 188 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 PSMG3Q9BT73 122 aaPredicted RBP7.37□□□□□ -1.23
VRK3-214ENST00000598553 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 SH3BGRL3Q9H299 93 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 Q9H3A6 140 aa7.37□□□□□ -1.23
VRK3-214ENST00000598553 A0A096LPF7 62 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 RBFOX3A6NFN3 312 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 TCL1AP56279 114 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 GNG5P63218 68 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 UBE2L3P68036 154 aaKnown RBP7.36□□□□□ -1.23
VRK3-214ENST00000598553 SERF2P84101 59 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 RHEBQ15382 184 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 SMUG1Q53HV7 270 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 RXFP4Q8TDU9 374 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 TVP23CQ96ET8 276 aa7.36□□□□□ -1.23
VRK3-214ENST00000598553 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 TRAV8-1A0A0A6YYK1 113 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 H3BNG1 76 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 SPINK4O60575 86 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 GPX1P07203 203 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 ZNF138P52744 262 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 ANXA2RQ3ZCQ2 193 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 KHDC3LQ587J8 217 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 OR10G4Q8NGN3 311 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 C18orf15Q96N68 181 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 MDFICQ9P1T7 246 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 RPH3ALQ9UNE2 315 aa7.35□□□□□ -1.23
VRK3-214ENST00000598553 IGHV1OR15-1A0A075B7D0 117 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 TRBV7-9A0A0J9YWB2 115 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 RBAKDNA6NC62 111 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 DIRC3C9JPN6 131 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 C9JQL5 133 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 NDUFS6O75380 124 aaKnown RBP7.34□□□□□ -1.23
VRK3-214ENST00000598553 IFNA1P01562 189 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 MBP02144 154 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 TAGLN2P37802 199 aaKnown RBP7.34□□□□□ -1.23
VRK3-214ENST00000598553 FHITP49789 147 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 TAS2R45P59539 299 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 ZNF506Q5JVG8 444 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 IBA57Q5T440 356 aaKnown RBP7.34□□□□□ -1.23
VRK3-214ENST00000598553 CBLN2Q8IUK8 224 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 LYPD1Q8N2G4 141 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 C6orf223Q8N319 242 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 MBD3L1Q8WWY6 194 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 SGK494Q96LW2 274 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 RPS10P5Q9NQ39 176 aa7.34□□□□□ -1.23
VRK3-214ENST00000598553 TRGV2A0A075B6R0 118 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 F6UZH7 168 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 M0R036 132 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 MT-ND4LP03901 98 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 CSN1S1P47710 185 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 RAB5BP61020 215 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 SFT2D1Q8WV19 159 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 Q9H8V8 135 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 BIN3Q9NQY0 253 aa7.33□□□□□ -1.24
VRK3-214ENST00000598553 PCLOQ9Y6V0 5065 aa7.32□□□□□ -1.24
VRK3-214ENST00000598553 C7orf77A4D0Y5 90 aa7.32□□□□□ -1.24
VRK3-214ENST00000598553 PGPA6NDG6 321 aa7.32□□□□□ -1.24
VRK3-214ENST00000598553 C1orf196B1AJZ1 125 aa7.32□□□□□ -1.24
VRK3-214ENST00000598553 MED14OSP0DP75 135 aa7.32□□□□□ -1.24
VRK3-214ENST00000598553 FUSP35637 526 aaKnown RBP eCLIP7.32□□□□□ -1.24
VRK3-214ENST00000598553 FHL2Q14192 279 aa7.32□□□□□ -1.24
VRK3-214ENST00000598553 UPK3BQ9BT76 320 aa7.32□□□□□ -1.24
VRK3-214ENST00000598553 MRPS16Q9Y3D3 137 aaKnown RBP7.32□□□□□ -1.24
VRK3-214ENST00000598553 A0A087WWC5 75 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 COLCA2A8K830 154 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 B4DEV8 164 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 GNRH2O43555 120 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 SRP19P09132 144 aaKnown RBP7.31□□□□□ -1.24
VRK3-214ENST00000598553 ARL14EPLP0DKL9 152 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 ZNF415Q09FC8 603 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 TMEM183BQ1AE95 376 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 TTC32Q5I0X7 151 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 Q6AWC8 147 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 GOLT1AQ6ZVE7 132 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 TMEM183AQ8IXX5 376 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 ZNF479Q96JC4 524 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 C8orf49Q96NF6 230 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 OTORQ9NRC9 128 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 NAGKQ9UJ70 344 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 LENEPQ9Y5L5 61 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 TNFRSF18Q9Y5U5 241 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 HSPG2P98160 4391 aa7.31□□□□□ -1.24
VRK3-214ENST00000598553 LOC100131303A0A0U1RQF7 123 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 ZNF80P51504 273 aaPredicted RBP7.3□□□□□ -1.24
VRK3-214ENST00000598553 CRYBA4P53673 196 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 KRTAP10-2P60368 255 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 CCL20P78556 96 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 PNRC1Q12796 327 aaPredicted RBP7.3□□□□□ -1.24
VRK3-214ENST00000598553 ACOT6Q3I5F7 207 aaPredicted RBP7.3□□□□□ -1.24
VRK3-214ENST00000598553 PQLC2Q6ZP29 291 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 TMEM75Q8N9X5 138 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 OR10G9Q8NGN4 311 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 OR10G7Q8NGN6 311 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 C11orf21Q9P2W6 132 aa7.3□□□□□ -1.24
VRK3-214ENST00000598553 RYR1P21817 5038 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms