RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 GCHFRP30047 84 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 FUSP35637 526 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRIM28-212ENST00000597995 CRYBA4P53673 196 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 SERF2P84101 59 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 MRPL23Q16540 153 aaKnown RBP8.51□□□□□ -1.05
TRIM28-212ENST00000597995 RGS21Q2M5E4 152 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 Q5VSD8 79 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 CMTM2Q8TAZ6 248 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 ASB13Q8WXK3 278 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 SGK494Q96LW2 274 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 ARPC5LQ9BPX5 153 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 TNFRSF18Q9Y5U5 241 aa8.51□□□□□ -1.05
TRIM28-212ENST00000597995 FXYD6-FXYD2A0A087WZ82 144 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 F6UZH7 168 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 KRTAP10-1P60331 282 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 ZNF415Q09FC8 603 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 FHL2Q14192 279 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 ZNF726P1Q15940 193 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 TMEM183BQ1AE95 376 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 FAM74A1Q5RGS3 127 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 NEGR1Q7Z3B1 354 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 TMEM183AQ8IXX5 376 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 OR2T35Q8NGX2 323 aa8.5□□□□□ -1.05
TRIM28-212ENST00000597995 GGTLC3B5MD39 225 aa8.49□□□□□ -1.05
TRIM28-212ENST00000597995 GNRH2O43555 120 aa8.49□□□□□ -1.05
TRIM28-212ENST00000597995 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
TRIM28-212ENST00000597995 TDRG1Q3Y452 100 aa8.49□□□□□ -1.05
TRIM28-212ENST00000597995 INO80EQ8NBZ0 244 aaPredicted RBP8.49□□□□□ -1.05
TRIM28-212ENST00000597995 LY96Q9Y6Y9 160 aa8.49□□□□□ -1.05
TRIM28-212ENST00000597995 MBP02144 154 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 TCRAP04437 139 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 SFTA3P0C7M3 94 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 ZNF80P51504 273 aaPredicted RBP8.48□□□□□ -1.05
TRIM28-212ENST00000597995 FAM159AQ6UWV7 190 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 IQCF2Q8IXL9 164 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 RASL10AQ92737 203 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 ZNF479Q96JC4 524 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 C8orf49Q96NF6 230 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 ACTR3CQ9C0K3 210 aaPredicted RBP8.48□□□□□ -1.05
TRIM28-212ENST00000597995 TREM1Q9NP99 234 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 CYTL1Q9NRR1 136 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 MSRB1Q9NZV6 116 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 C11orf21Q9P2W6 132 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 NAGKQ9UJ70 344 aa8.48□□□□□ -1.05
TRIM28-212ENST00000597995 TRAV21A0A0B4J279 112 aa8.47□□□□□ -1.05
TRIM28-212ENST00000597995 IGHV3-16A0A0C4DH30 117 aa8.47□□□□□ -1.05
TRIM28-212ENST00000597995 SMLR1H3BR10 107 aa8.47□□□□□ -1.05
TRIM28-212ENST00000597995 CXorf1O96002 111 aa8.47□□□□□ -1.05
TRIM28-212ENST00000597995 GCSHP23434 173 aa8.47□□□□□ -1.05
TRIM28-212ENST00000597995 SUMO1P63165 101 aaKnown RBP8.47□□□□□ -1.05
TRIM28-212ENST00000597995 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
TRIM28-212ENST00000597995 TRGV11A0A075B6L2 103 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 TRGV4A0A0C4DH28 118 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 K7EQD1 137 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 TYMSP04818 313 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 EVI2AP22794 236 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 SRIP30626 198 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 SPXQ9BT56 116 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 TMEM167BQ9NRX6 74 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 EPDR1Q9UM22 224 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 PSG8Q9UQ74 426 aa8.46□□□□□ -1.06
TRIM28-212ENST00000597995 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
TRIM28-212ENST00000597995 VPS13BQ7Z7G8 4022 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 BORCS7-ASMTA0A0B4J1R7 106 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 SERTM2A0A1B0GWG4 89 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 ARPC5O15511 151 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 ORM1P02763 201 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 WFDC10BQ8IUB3 73 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 LINC00479Q96M42 142 aa8.45□□□□□ -1.06
TRIM28-212ENST00000597995 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
TRIM28-212ENST00000597995 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
TRIM28-212ENST00000597995 CTXND1A0A1B0GTU2 59 aa8.44□□□□□ -1.06
TRIM28-212ENST00000597995 A0A1W2PRE2 83 aa8.44□□□□□ -1.06
TRIM28-212ENST00000597995 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
TRIM28-212ENST00000597995 M0R2P5 195 aa8.44□□□□□ -1.06
TRIM28-212ENST00000597995 FGF8P55075 233 aaPredicted RBP8.44□□□□□ -1.06
TRIM28-212ENST00000597995 FLI1Q01543 452 aaPredicted RBP8.44□□□□□ -1.06
TRIM28-212ENST00000597995 TMEM75Q8N9X5 138 aa8.44□□□□□ -1.06
TRIM28-212ENST00000597995 OR11H4Q8NGC9 324 aa8.44□□□□□ -1.06
TRIM28-212ENST00000597995 PCNPQ8WW12 178 aaKnown RBP8.44□□□□□ -1.06
TRIM28-212ENST00000597995 TRAV4A0A0B4J268 109 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 TRAV34A0A0B4J273 112 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 GCGP01275 180 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
TRIM28-212ENST00000597995 GYPEP15421 78 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 DPPA3Q6W0C5 159 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 TXNDC17Q9BRA2 123 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 SDF2L1Q9HCN8 221 aa8.43□□□□□ -1.06
TRIM28-212ENST00000597995 LOC100131303A0A0U1RQF7 123 aa8.42□□□□□ -1.06
TRIM28-212ENST00000597995 C9JCJ5 164 aa8.42□□□□□ -1.06
TRIM28-212ENST00000597995 TAAR5O14804 337 aa8.42□□□□□ -1.06
TRIM28-212ENST00000597995 CRYGDP07320 174 aa8.42□□□□□ -1.06
TRIM28-212ENST00000597995 FHITP49789 147 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms