RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 MRPL32Q9BYC8 188 aaKnown RBP11.61□□□□□ -0.55
PNKP-210ENST00000597965 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 IGHV3-53P01767 116 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 ORM1P02763 201 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 SRIP30626 198 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 SERF2P84101 59 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 ICAM4Q14773 271 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 AKR1C8PQ5T2L2 129 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 DPPA3Q6W0C5 159 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 IQCF2Q8IXL9 164 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 EXOC3-AS1Q8N2X6 119 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 MRPL16Q9NX20 251 aaKnown RBP11.6□□□□□ -0.55
PNKP-210ENST00000597965 ZNF492Q9P255 531 aa11.6□□□□□ -0.55
PNKP-210ENST00000597965 NBEAP1P0C6P0 100 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 PYYP10082 97 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 CSN1S1P47710 185 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 ZNF138P52744 262 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 FAM122CQ6P4D5 195 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 C8orf49Q96NF6 230 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 NPCDR1Q9BY65 106 aa11.59□□□□□ -0.55
PNKP-210ENST00000597965 DMBT1Q9UGM3 2413 aaPredicted RBP11.58□□□□□ -0.56
PNKP-210ENST00000597965 A0A087WTM6 91 aa11.58□□□□□ -0.56
PNKP-210ENST00000597965 FHL2Q14192 279 aa11.58□□□□□ -0.56
PNKP-210ENST00000597965 TXNDC17Q9BRA2 123 aa11.58□□□□□ -0.56
PNKP-210ENST00000597965 SPXQ9BT56 116 aa11.58□□□□□ -0.56
PNKP-210ENST00000597965 OR51M1Q9H341 326 aa11.58□□□□□ -0.56
PNKP-210ENST00000597965 MSRB1Q9NZV6 116 aa11.58□□□□□ -0.56
PNKP-210ENST00000597965 IGKV2-40A0A087WW87 121 aaPredicted RBP11.57□□□□□ -0.56
PNKP-210ENST00000597965 IGKV2D-40P01614 121 aaPredicted RBP11.57□□□□□ -0.56
PNKP-210ENST00000597965 XGP55808 180 aa11.57□□□□□ -0.56
PNKP-210ENST00000597965 Q5VSD8 79 aa11.57□□□□□ -0.56
PNKP-210ENST00000597965 UQCC3Q6UW78 93 aa11.57□□□□□ -0.56
PNKP-210ENST00000597965 SH2D6Q7Z4S9 175 aa11.57□□□□□ -0.56
PNKP-210ENST00000597965 FAM210AQ96ND0 272 aa11.57□□□□□ -0.56
PNKP-210ENST00000597965 SLC25A2Q9BXI2 301 aa11.57□□□□□ -0.56
PNKP-210ENST00000597965 TP53TG3Q9ULZ0 132 aa11.57□□□□□ -0.56
PNKP-210ENST00000597965 RBAKDNA6NC62 111 aa11.56□□□□□ -0.56
PNKP-210ENST00000597965 C9JCJ5 164 aa11.56□□□□□ -0.56
PNKP-210ENST00000597965 C17orf112F2Z3M2 114 aa11.56□□□□□ -0.56
PNKP-210ENST00000597965 K7EQD1 137 aa11.56□□□□□ -0.56
PNKP-210ENST00000597965 TOR2AQ5JU69 321 aa11.56□□□□□ -0.56
PNKP-210ENST00000597965 MBD3L1Q8WWY6 194 aa11.56□□□□□ -0.56
PNKP-210ENST00000597965 LENEPQ9Y5L5 61 aa11.56□□□□□ -0.56
PNKP-210ENST00000597965 TRGV11A0A075B6L2 103 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 TRAV1-1A0A0B4J248 108 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 H2AFB1P0C5Y9 115 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 DNAH10OSP0CZ25 163 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 GCSHP23434 173 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 SRSF3P84103 164 aaKnown RBP11.55□□□□□ -0.56
PNKP-210ENST00000597965 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 OR10G4Q8NGN3 311 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 RASL10AQ92737 203 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 PAXXQ9BUH6 204 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 TNFRSF18Q9Y5U5 241 aa11.55□□□□□ -0.56
PNKP-210ENST00000597965 FAM229AH3BQW9 127 aa11.54□□□□□ -0.56
PNKP-210ENST00000597965 MBP02144 154 aa11.54□□□□□ -0.56
PNKP-210ENST00000597965 CCL20P78556 96 aa11.54□□□□□ -0.56
PNKP-210ENST00000597965 ZNF726P1Q15940 193 aa11.54□□□□□ -0.56
PNKP-210ENST00000597965 FFAR4Q5NUL3 377 aa11.54□□□□□ -0.56
PNKP-210ENST00000597965 PRR9Q5T870 116 aa11.54□□□□□ -0.56
PNKP-210ENST00000597965 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
PNKP-210ENST00000597965 KRBOX1C9JBD0 128 aa11.53□□□□□ -0.56
PNKP-210ENST00000597965 CRYGDP07320 174 aa11.53□□□□□ -0.56
PNKP-210ENST00000597965 GYPEP15421 78 aa11.53□□□□□ -0.56
PNKP-210ENST00000597965 RAB2AP61019 212 aa11.53□□□□□ -0.56
PNKP-210ENST00000597965 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
PNKP-210ENST00000597965 PSCAO43653 123 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 KRTAP10-1P60331 282 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 ACOT6Q3I5F7 207 aaPredicted RBP11.52□□□□□ -0.57
PNKP-210ENST00000597965 MUC21Q5SSG8 566 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 Q6AWC8 147 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 MIR17HGQ75NE6 70 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 OR10G9Q8NGN4 311 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 OR10G7Q8NGN6 311 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 NTN5Q8WTR8 489 aaPredicted RBP11.52□□□□□ -0.57
PNKP-210ENST00000597965 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
PNKP-210ENST00000597965 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 TMEM218A2RU14 115 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 OR7C2O60412 319 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 OR10J4P0C629 311 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 FUSP35637 526 aaKnown RBP eCLIP11.51□□□□□ -0.57
PNKP-210ENST00000597965 RANP62826 216 aaKnown RBP11.51□□□□□ -0.57
PNKP-210ENST00000597965 WFDC10BQ8IUB3 73 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 Q8TAT8 98 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 ZNF479Q96JC4 524 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 MDFICQ9P1T7 246 aa11.51□□□□□ -0.57
PNKP-210ENST00000597965 C9JQL5 133 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 SFTA3P0C7M3 94 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 TAS2R45P59539 299 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 TMEM183BQ1AE95 376 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 TDRG1Q3Y452 100 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 TMEM183AQ8IXX5 376 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 OR4C5Q8NGB2 326 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 TMEM70Q9BUB7 260 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms