RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 A0A1W2PPQ1 181 aa10.36□□□□□ -0.75
LIG1-215ENST00000597901 SFTA3P0C7M3 94 aa10.36□□□□□ -0.75
LIG1-215ENST00000597901 MRPL23Q16540 153 aaKnown RBP10.36□□□□□ -0.75
LIG1-215ENST00000597901 RGS21Q2M5E4 152 aa10.36□□□□□ -0.75
LIG1-215ENST00000597901 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
LIG1-215ENST00000597901 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
LIG1-215ENST00000597901 PSG8Q9UQ74 426 aa10.36□□□□□ -0.75
LIG1-215ENST00000597901 K7EQM0 130 aa10.35□□□□□ -0.75
LIG1-215ENST00000597901 M0R2P5 195 aa10.35□□□□□ -0.75
LIG1-215ENST00000597901 IGLV2-11P01706 119 aa10.35□□□□□ -0.75
LIG1-215ENST00000597901 TYMSP04818 313 aa10.35□□□□□ -0.75
LIG1-215ENST00000597901 ZNF80P51504 273 aaPredicted RBP10.35□□□□□ -0.75
LIG1-215ENST00000597901 ZNF575Q86XF7 245 aa10.35□□□□□ -0.75
LIG1-215ENST00000597901 KCNS1Q96KK3 526 aa10.35□□□□□ -0.75
LIG1-215ENST00000597901 NDFIP1Q9BT67 221 aa10.35□□□□□ -0.75
LIG1-215ENST00000597901 G3V3Q6 166 aa10.34□□□□□ -0.75
LIG1-215ENST00000597901 TAAR5O14804 337 aa10.34□□□□□ -0.75
LIG1-215ENST00000597901 SIVA1O15304 175 aa10.34□□□□□ -0.75
LIG1-215ENST00000597901 ZNF726P1Q15940 193 aa10.34□□□□□ -0.75
LIG1-215ENST00000597901 OR4C5Q8NGB2 326 aa10.34□□□□□ -0.75
LIG1-215ENST00000597901 SDF2L1Q9HCN8 221 aa10.34□□□□□ -0.75
LIG1-215ENST00000597901 A0A1W2PRE2 83 aa10.33□□□□□ -0.76
LIG1-215ENST00000597901 GGTLC3B5MD39 225 aa10.33□□□□□ -0.76
LIG1-215ENST00000597901 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
LIG1-215ENST00000597901 FLI1Q01543 452 aaPredicted RBP10.33□□□□□ -0.76
LIG1-215ENST00000597901 NEGR1Q7Z3B1 354 aa10.33□□□□□ -0.76
LIG1-215ENST00000597901 PRNTQ86SH4 94 aa10.33□□□□□ -0.76
LIG1-215ENST00000597901 CYTL1Q9NRR1 136 aa10.33□□□□□ -0.76
LIG1-215ENST00000597901 C11orf21Q9P2W6 132 aa10.33□□□□□ -0.76
LIG1-215ENST00000597901 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 K7EQD1 137 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 NXPH4O95158 308 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 GCGP01275 180 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 SAPCD1Q5SSQ6 148 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 CYB561D1Q8N8Q1 229 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
LIG1-215ENST00000597901 MUC4Q99102 2169 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 FBLL1A6NHQ2 334 aaKnown RBP10.31□□□□□ -0.76
LIG1-215ENST00000597901 C16orf90A8MZG2 172 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 ARPC5O15511 151 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 ORM1P02763 201 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 GYPEP15421 78 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 SMUG1Q53HV7 270 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 TMEM75Q8N9X5 138 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
LIG1-215ENST00000597901 TRAV34A0A0B4J273 112 aa10.3□□□□□ -0.76
LIG1-215ENST00000597901 C9JCJ5 164 aa10.3□□□□□ -0.76
LIG1-215ENST00000597901 IFNA7P01567 189 aa10.3□□□□□ -0.76
LIG1-215ENST00000597901 PFN1P07737 140 aaKnown RBP10.3□□□□□ -0.76
LIG1-215ENST00000597901 SRIP30626 198 aa10.3□□□□□ -0.76
LIG1-215ENST00000597901 AKR1C8PQ5T2L2 129 aa10.3□□□□□ -0.76
LIG1-215ENST00000597901 SMLR1H3BR10 107 aa10.29□□□□□ -0.76
LIG1-215ENST00000597901 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
LIG1-215ENST00000597901 UBE2G2P60604 165 aa10.29□□□□□ -0.76
LIG1-215ENST00000597901 ZNF876PQ49A33 203 aa10.29□□□□□ -0.76
LIG1-215ENST00000597901 PCNPQ8WW12 178 aaKnown RBP10.29□□□□□ -0.76
LIG1-215ENST00000597901 RS1O15537 224 aa10.28□□□□□ -0.76
LIG1-215ENST00000597901 LINC00315P59091 139 aa10.28□□□□□ -0.76
LIG1-215ENST00000597901 ZFP69Q49AA0 526 aa10.28□□□□□ -0.76
LIG1-215ENST00000597901 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
LIG1-215ENST00000597901 LOC100131303A0A0U1RQF7 123 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 PGPEP1LA6NFU8 196 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 FAM74A7A6NL05 159 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 GATA1P15976 413 aaPredicted RBP10.27□□□□□ -0.77
LIG1-215ENST00000597901 PPT1P50897 306 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 CFAP126Q5VTH2 177 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 SPATA12Q7Z6I5 190 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 PTH2Q96A98 100 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 C9orf85Q96MD7 179 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 TXNDC17Q9BRA2 123 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 TNFRSF18Q9Y5U5 241 aa10.27□□□□□ -0.77
LIG1-215ENST00000597901 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
LIG1-215ENST00000597901 IGKV3D-20A0A0C4DH25 116 aa10.26□□□□□ -0.77
LIG1-215ENST00000597901 PEX7O00628 323 aa10.26□□□□□ -0.77
LIG1-215ENST00000597901 CIDEAO60543 219 aa10.26□□□□□ -0.77
LIG1-215ENST00000597901 RNASE3P12724 160 aaKnown RBP10.26□□□□□ -0.77
LIG1-215ENST00000597901 Q6ZRN7 208 aaPredicted RBP10.26□□□□□ -0.77
LIG1-215ENST00000597901 KCNRGQ8N5I3 272 aa10.26□□□□□ -0.77
LIG1-215ENST00000597901 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
LIG1-215ENST00000597901 ARL2-SNX15V9GYD0 113 aa10.26□□□□□ -0.77
LIG1-215ENST00000597901 MAP1LC3B2A6NCE7 125 aa10.25□□□□□ -0.77
LIG1-215ENST00000597901 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
LIG1-215ENST00000597901 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
LIG1-215ENST00000597901 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
LIG1-215ENST00000597901 MAP1LC3BQ9GZQ8 125 aa10.25□□□□□ -0.77
LIG1-215ENST00000597901 LY96Q9Y6Y9 160 aa10.25□□□□□ -0.77
LIG1-215ENST00000597901 PCLOQ9Y6V0 5065 aa10.25□□□□□ -0.77
LIG1-215ENST00000597901 IGHV3-73A0A0B4J1V6 119 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 FHITP49789 147 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 CRIP1P50238 77 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 KRTAP10-2P60368 255 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 NHLRC2Q8NBF2 726 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 OR11H4Q8NGC9 324 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 STOML3Q8TAV4 291 aa10.24□□□□□ -0.77
LIG1-215ENST00000597901 TRBV6-4A0A1B0GX49 114 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms