RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 RAB19A4D1S5 217 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 SH2D1AO60880 128 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 TCL1AP56279 114 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 ZNF674Q2M3X9 581 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 CLLU1Q5K131 121 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 NOP10Q9NPE3 64 aaKnown RBP10.26□□□□□ -0.77
VRK3-213ENST00000597215 GSN-AS1Q9NRJ2 163 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 C11orf21Q9P2W6 132 aa10.26□□□□□ -0.77
VRK3-213ENST00000597215 TYMSP04818 313 aa10.25□□□□□ -0.77
VRK3-213ENST00000597215 CRIP1P50238 77 aa10.25□□□□□ -0.77
VRK3-213ENST00000597215 CEBPGP53567 150 aa10.25□□□□□ -0.77
VRK3-213ENST00000597215 DAZ2Q13117 558 aaKnown RBP10.25□□□□□ -0.77
VRK3-213ENST00000597215 PEA15Q15121 130 aa10.25□□□□□ -0.77
VRK3-213ENST00000597215 PARLQ9H300 379 aa10.25□□□□□ -0.77
VRK3-213ENST00000597215 SMDT1Q9H4I9 107 aa10.25□□□□□ -0.77
VRK3-213ENST00000597215 C9JCJ5 164 aa10.24□□□□□ -0.77
VRK3-213ENST00000597215 C3orf84H3BNL1 204 aa10.24□□□□□ -0.77
VRK3-213ENST00000597215 ORM1P02763 201 aa10.24□□□□□ -0.77
VRK3-213ENST00000597215 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
VRK3-213ENST00000597215 MGST1P10620 155 aaKnown RBP10.24□□□□□ -0.77
VRK3-213ENST00000597215 DAD1P61803 113 aa10.24□□□□□ -0.77
VRK3-213ENST00000597215 C12orf74Q32Q52 190 aa10.24□□□□□ -0.77
VRK3-213ENST00000597215 TRBV20OR9-2A0A075B6H5 130 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 B4DEV8 164 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 GNRH2O43555 120 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 PRR27Q6MZM9 219 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 Q6ZTC4 211 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 SPXQ9BT56 116 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 BIN3Q9NQY0 253 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 MDFICQ9P1T7 246 aa10.23□□□□□ -0.77
VRK3-213ENST00000597215 IGKV3D-20A0A0C4DH25 116 aa10.22□□□□□ -0.77
VRK3-213ENST00000597215 M0R036 132 aa10.22□□□□□ -0.77
VRK3-213ENST00000597215 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
VRK3-213ENST00000597215 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
VRK3-213ENST00000597215 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
VRK3-213ENST00000597215 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
VRK3-213ENST00000597215 PHLDA1Q8WV24 401 aaPredicted RBP10.22□□□□□ -0.77
VRK3-213ENST00000597215 SMIM7Q9BQ49 75 aa10.22□□□□□ -0.77
VRK3-213ENST00000597215 TRGV1A0A0A0MS02 117 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 TRAV10A0A0B4J240 114 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 NUPR2A6NF83 97 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 PGPEP1LA6NFU8 196 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 KRBOX1C9JBD0 128 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 SPINK4O60575 86 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 ASIPP42127 132 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 LGALS9BQ3B8N2 356 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
VRK3-213ENST00000597215 GAGE12BA1L429 117 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 ZNF727A8MUV8 499 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 GAGE7O76087 117 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 GAGE12FP0CL80 117 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 GAGE12GP0CL81 117 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 GAGE12IP0CL82 117 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 S100A4P26447 101 aaKnown RBP10.2□□□□□ -0.78
VRK3-213ENST00000597215 SRSF3P84103 164 aaKnown RBP10.2□□□□□ -0.78
VRK3-213ENST00000597215 OR5I1Q13606 314 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 FAM74A3Q4VXF1 159 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 Q6ZTI0 123 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 DAZAP1Q96EP5 407 aaKnown RBP10.2□□□□□ -0.78
VRK3-213ENST00000597215 LY96Q9Y6Y9 160 aa10.2□□□□□ -0.78
VRK3-213ENST00000597215 DEFB131BA0A096LNP1 70 aa10.19□□□□□ -0.78
VRK3-213ENST00000597215 C9JQL5 133 aa10.19□□□□□ -0.78
VRK3-213ENST00000597215 M0R2P5 195 aa10.19□□□□□ -0.78
VRK3-213ENST00000597215 DNLZQ5SXM8 178 aa10.19□□□□□ -0.78
VRK3-213ENST00000597215 CASC10Q5T4H9 136 aa10.19□□□□□ -0.78
VRK3-213ENST00000597215 CEMP1Q6PRD7 247 aaPredicted RBP10.19□□□□□ -0.78
VRK3-213ENST00000597215 OCC1Q8TAD7 63 aa10.19□□□□□ -0.78
VRK3-213ENST00000597215 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
VRK3-213ENST00000597215 MRPL16Q9NX20 251 aaKnown RBP10.19□□□□□ -0.78
VRK3-213ENST00000597215 TRGV2A0A075B6R0 118 aa10.18□□□□□ -0.78
VRK3-213ENST00000597215 TMSB15BA0A087X1C1 80 aa10.18□□□□□ -0.78
VRK3-213ENST00000597215 C19orf71A6NCJ1 209 aa10.18□□□□□ -0.78
VRK3-213ENST00000597215 K7EN84 100 aa10.18□□□□□ -0.78
VRK3-213ENST00000597215 ATP5G1P05496 136 aa10.18□□□□□ -0.78
VRK3-213ENST00000597215 CXCL1P09341 107 aa10.18□□□□□ -0.78
VRK3-213ENST00000597215 RNASE3P12724 160 aaKnown RBP10.18□□□□□ -0.78
VRK3-213ENST00000597215 KLK5Q9Y337 293 aaPredicted RBP10.18□□□□□ -0.78
VRK3-213ENST00000597215 GRIFINA4D1Z8 144 aa10.17□□□□□ -0.78
VRK3-213ENST00000597215 H3BVH4 76 aa10.17□□□□□ -0.78
VRK3-213ENST00000597215 P01737 135 aa10.17□□□□□ -0.78
VRK3-213ENST00000597215 HTN3P15516 51 aa10.17□□□□□ -0.78
VRK3-213ENST00000597215 RPL19P84098 196 aaKnown RBP10.17□□□□□ -0.78
VRK3-213ENST00000597215 RASL10AQ92737 203 aa10.17□□□□□ -0.78
VRK3-213ENST00000597215 C18orf15Q96N68 181 aa10.17□□□□□ -0.78
VRK3-213ENST00000597215 IL36BQ9NZH7 164 aa10.17□□□□□ -0.78
VRK3-213ENST00000597215 RPS20P60866 119 aaKnown RBP10.16□□□□□ -0.78
VRK3-213ENST00000597215 TMEM241Q24JQ0 296 aa10.16□□□□□ -0.78
VRK3-213ENST00000597215 SOHLH1Q5JUK2 328 aa10.16□□□□□ -0.78
VRK3-213ENST00000597215 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
VRK3-213ENST00000597215 OR2D3Q8NGH3 330 aa10.16□□□□□ -0.78
VRK3-213ENST00000597215 XKRY2A2RUG3 117 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 ARMS2P0C7Q2 107 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 MED14OSP0DP75 135 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 ZNF876PQ49A33 203 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 NUDT10Q8NFP7 164 aa10.15□□□□□ -0.78
VRK3-213ENST00000597215 PTH2Q96A98 100 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms