RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TTC32Q5I0X7 151 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 C6orf223Q8N319 242 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 CYTL1Q9NRR1 136 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 PSG8Q9UQ74 426 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 ICOSQ9Y6W8 199 aa7.26□□□□□ -1.25
CCDC9-203ENST00000596938 CTXND1A0A1B0GTU2 59 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 A0A1W2PPQ1 181 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 F6UZH7 168 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 M0R2P5 195 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 ARPC5O15511 151 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 MRPL23Q16540 153 aaKnown RBP7.25□□□□□ -1.25
CCDC9-203ENST00000596938 SAPCD1Q5SSQ6 148 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 AKR1C8PQ5T2L2 129 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 CYB561D1Q8N8Q1 229 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 TMEM75Q8N9X5 138 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 SGK494Q96LW2 274 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 NKX6-2Q9C056 277 aaPredicted RBP7.25□□□□□ -1.25
CCDC9-203ENST00000596938 SDF2L1Q9HCN8 221 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 NAGKQ9UJ70 344 aa7.25□□□□□ -1.25
CCDC9-203ENST00000596938 TRGV4A0A0C4DH28 118 aa7.24□□□□□ -1.25
CCDC9-203ENST00000596938 TYMSP04818 313 aa7.24□□□□□ -1.25
CCDC9-203ENST00000596938 ZNF80P51504 273 aaPredicted RBP7.24□□□□□ -1.25
CCDC9-203ENST00000596938 FLI1Q01543 452 aaPredicted RBP7.24□□□□□ -1.25
CCDC9-203ENST00000596938 SMUG1Q53HV7 270 aa7.24□□□□□ -1.25
CCDC9-203ENST00000596938 ZNF479Q96JC4 524 aa7.24□□□□□ -1.25
CCDC9-203ENST00000596938 C8orf49Q96NF6 230 aa7.24□□□□□ -1.25
CCDC9-203ENST00000596938 NACAE9PAV3 2078 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 IFNA7P01567 189 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 PFN1P07737 140 aaKnown RBP7.23□□□□□ -1.25
CCDC9-203ENST00000596938 SFTA3P0C7M3 94 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 MED14OSP0DP75 135 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 TNP2Q05952 138 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 LYPD5Q6UWN5 251 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 NEGR1Q7Z3B1 354 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 PRNTQ86SH4 94 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 KCNRGQ8N5I3 272 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 OR4C5Q8NGB2 326 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 PTH2Q96A98 100 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 C11orf21Q9P2W6 132 aa7.23□□□□□ -1.25
CCDC9-203ENST00000596938 FAM74A7A6NL05 159 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 HMSDA8MTL9 139 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 CIDEAO60543 219 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 GCGP01275 180 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 ORM1P02763 201 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 ZNF345Q14585 488 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 ZFP69Q49AA0 526 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 HIST1H2BAQ96A08 127 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 LINC00479Q96M42 142 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
CCDC9-203ENST00000596938 FABP5P3A8MUU1 101 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 SMLR1H3BR10 107 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 K7EQD1 137 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 SIVA1O15304 175 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 PPT1P50897 306 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 FGF8P55075 233 aaPredicted RBP7.21□□□□□ -1.26
CCDC9-203ENST00000596938 ZNF876PQ49A33 203 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 COX8CQ7Z4L0 72 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 STOML3Q8TAV4 291 aa7.21□□□□□ -1.26
CCDC9-203ENST00000596938 LRP1BQ9NZR2 4599 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 TRAV34A0A0B4J273 112 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 A0A0D9SG52 128 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 MAP1LC3B2A6NCE7 125 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 UMAD1C9J7I0 102 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 C9JCJ5 164 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 PEX7O00628 323 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 NXPH4O95158 308 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 SEC11BP0C7V7 166 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 GYPEP15421 78 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 SRIP30626 198 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 FHITP49789 147 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 UBE2G2P60604 165 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 SH2D6Q7Z4S9 175 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 OR11H4Q8NGC9 324 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 PCNPQ8WW12 178 aaKnown RBP7.2□□□□□ -1.26
CCDC9-203ENST00000596938 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 TXNDC17Q9BRA2 123 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 TCEAL7Q9BRU2 100 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 MAP1LC3BQ9GZQ8 125 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 ZFP30Q9Y2G7 519 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 ARL2-SNX15V9GYD0 113 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 MUC4Q99102 2169 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 RYR1P21817 5038 aa7.2□□□□□ -1.26
CCDC9-203ENST00000596938 K7EP13 123 aa7.19□□□□□ -1.26
CCDC9-203ENST00000596938 RS1O15537 224 aa7.19□□□□□ -1.26
CCDC9-203ENST00000596938 RNASE3P12724 160 aaKnown RBP7.19□□□□□ -1.26
CCDC9-203ENST00000596938 GATA1P15976 413 aaPredicted RBP7.19□□□□□ -1.26
CCDC9-203ENST00000596938 PIK3CD-AS1Q5SR53 167 aa7.19□□□□□ -1.26
CCDC9-203ENST00000596938 CFAP126Q5VTH2 177 aa7.19□□□□□ -1.26
CCDC9-203ENST00000596938 MBD3L1Q8WWY6 194 aa7.19□□□□□ -1.26
CCDC9-203ENST00000596938 PCLOQ9Y6V0 5065 aa7.19□□□□□ -1.26
CCDC9-203ENST00000596938 TRAV9-2A0A087WT02 112 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 IGKV3D-20A0A0C4DH25 116 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 TRBV6-1A0A0K0K1D8 114 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 TRBV6-4A0A1B0GX49 114 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 CRIP1P50238 77 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 TIRAPP58753 221 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 DPPA3Q6W0C5 159 aa7.18□□□□□ -1.26
CCDC9-203ENST00000596938 FMC1Q96HJ9 113 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms