RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 CENPWQ5EE01 88 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 IBA57Q5T440 356 aaKnown RBP5.97□□□□□ -1.45
VRK3-211ENST00000596445 NHLRC2Q8NBF2 726 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 C11orf72Q8NBR9 251 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 SMIM12Q96EX1 92 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 SDF2L1Q9HCN8 221 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 NOP10Q9NPE3 64 aaKnown RBP5.97□□□□□ -1.45
VRK3-211ENST00000596445 GSN-AS1Q9NRJ2 163 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 C11orf21Q9P2W6 132 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 STARD9Q9P2P6 4700 aa5.97□□□□□ -1.45
VRK3-211ENST00000596445 C3orf84H3BNL1 204 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 GNRH2O43555 120 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 SH2D1AO60880 128 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 SRP19P09132 144 aaKnown RBP5.96□□□□□ -1.46
VRK3-211ENST00000596445 TCL1AP56279 114 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 ZNF415Q09FC8 603 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 PEA15Q15121 130 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 C12orf74Q32Q52 190 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 CLLU1Q5K131 121 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 PARLQ9H300 379 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 SMDT1Q9H4I9 107 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 MDFICQ9P1T7 246 aa5.96□□□□□ -1.46
VRK3-211ENST00000596445 TRBV20OR9-2A0A075B6H5 130 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 IGHV3-16A0A0C4DH30 117 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 C9JCJ5 164 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 IGLV2-8P01709 118 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 ORM1P02763 201 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 TYMSP04818 313 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 CEBPGP53567 150 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 DAD1P61803 113 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 Q6ZTC4 211 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 SPXQ9BT56 116 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 BIN3Q9NQY0 253 aa5.95□□□□□ -1.46
VRK3-211ENST00000596445 IGKV3D-20A0A0C4DH25 116 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 B4DEV8 164 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 KRBOX1C9JBD0 128 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 SPINK4O60575 86 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 DEFB130BP0DP73 79 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 DEFB130AP0DP74 79 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 MGST1P10620 155 aaKnown RBP5.94□□□□□ -1.46
VRK3-211ENST00000596445 SRSF3P84103 164 aaKnown RBP5.94□□□□□ -1.46
VRK3-211ENST00000596445 LGALS9BQ3B8N2 356 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 LINC01559Q495D7 138 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 PRR27Q6MZM9 219 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 LINC00612Q8N6U2 182 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 PHLDA1Q8WV24 401 aaPredicted RBP5.94□□□□□ -1.46
VRK3-211ENST00000596445 SMIM7Q9BQ49 75 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 MUC4Q99102 2169 aa5.94□□□□□ -1.46
VRK3-211ENST00000596445 LYSTQ99698 3801 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 TRGV1A0A0A0MS02 117 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 TRAV10A0A0B4J240 114 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 NUPR2A6NF83 97 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 PGPEP1LA6NFU8 196 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 ZNF727A8MUV8 499 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 C9JQL5 133 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 M0R036 132 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 GAGE7O76087 117 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 GAGE12FP0CL80 117 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 GAGE12GP0CL81 117 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 GAGE12IP0CL82 117 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 ASIPP42127 132 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 OR5I1Q13606 314 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 FAM74A3Q4VXF1 159 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 DNLZQ5SXM8 178 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 CASC10Q5T4H9 136 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 ZFAND6Q6FIF0 208 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 CEMP1Q6PRD7 247 aaPredicted RBP5.93□□□□□ -1.46
VRK3-211ENST00000596445 Q6ZTI0 123 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 ZNF575Q86XF7 245 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 OCC1Q8TAD7 63 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
VRK3-211ENST00000596445 C9orf85Q96MD7 179 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 LY96Q9Y6Y9 160 aa5.93□□□□□ -1.46
VRK3-211ENST00000596445 DEFB131BA0A096LNP1 70 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 C19orf71A6NCJ1 209 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 K7EN84 100 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 M0R2P5 195 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 ATP5G1P05496 136 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 CXCL1P09341 107 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 RNASE3P12724 160 aaKnown RBP5.92□□□□□ -1.46
VRK3-211ENST00000596445 S100A4P26447 101 aaKnown RBP5.92□□□□□ -1.46
VRK3-211ENST00000596445 RPL19P84098 196 aaKnown RBP5.92□□□□□ -1.46
VRK3-211ENST00000596445 RASL10AQ92737 203 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 C18orf15Q96N68 181 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 MRPL16Q9NX20 251 aaKnown RBP5.92□□□□□ -1.46
VRK3-211ENST00000596445 IL36BQ9NZH7 164 aa5.92□□□□□ -1.46
VRK3-211ENST00000596445 KLK5Q9Y337 293 aaPredicted RBP5.92□□□□□ -1.46
VRK3-211ENST00000596445 DYNC2H1Q8NCM8 4307 aaKnown RBP5.92□□□□□ -1.46
VRK3-211ENST00000596445 TRGV2A0A075B6R0 118 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 TMSB15BA0A087X1C1 80 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 P01737 135 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 ARMS2P0C7Q2 107 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 TMEM241Q24JQ0 296 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 SOHLH1Q5JUK2 328 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 PTH2Q96A98 100 aa5.91□□□□□ -1.46
VRK3-211ENST00000596445 NACAE9PAV3 2078 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 XKRY2A2RUG3 117 aa5.9□□□□□ -1.46
VRK3-211ENST00000596445 H3BVH4 76 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms