RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
HOMER3-208ENST00000595756 CBY3A6NI87 242 aa12.56□□□□□ -0.4
HOMER3-208ENST00000595756 F5H768 121 aa12.56□□□□□ -0.4
HOMER3-208ENST00000595756 S100A9P06702 114 aaKnown RBP12.56□□□□□ -0.4
HOMER3-208ENST00000595756 MED14OSP0DP75 135 aa12.56□□□□□ -0.4
HOMER3-208ENST00000595756 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
HOMER3-208ENST00000595756 Q6AWC8 147 aa12.56□□□□□ -0.4
HOMER3-208ENST00000595756 FMC1Q96HJ9 113 aa12.56□□□□□ -0.4
HOMER3-208ENST00000595756 HTN1P15515 57 aa12.55□□□□□ -0.4
HOMER3-208ENST00000595756 UBE2G1P62253 170 aa12.55□□□□□ -0.4
HOMER3-208ENST00000595756 CCL20P78556 96 aa12.55□□□□□ -0.4
HOMER3-208ENST00000595756 PRNTQ86SH4 94 aa12.55□□□□□ -0.4
HOMER3-208ENST00000595756 KLF12Q9Y4X4 402 aa12.55□□□□□ -0.4
HOMER3-208ENST00000595756 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 TRBV6-1A0A0K0K1D8 114 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 RGS13O14921 159 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 IGLV2-11P01706 119 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 SMUG1Q53HV7 270 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 EIF4E3Q8N5X7 224 aaKnown RBP12.54□□□□□ -0.4
HOMER3-208ENST00000595756 ZNF680Q8NEM1 530 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 SGK494Q96LW2 274 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
HOMER3-208ENST00000595756 AKR1C3P42330 323 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 TMEM183BQ1AE95 376 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 PRR9Q5T870 116 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 TEX261Q6UWH6 196 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
HOMER3-208ENST00000595756 LRP1BQ9NZR2 4599 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 HSPG2P98160 4391 aa12.53□□□□□ -0.4
HOMER3-208ENST00000595756 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 PDE6DO43924 150 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 NUDT3O95989 172 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 MEF2BQ02080 365 aaPredicted RBP12.52□□□□□ -0.41
HOMER3-208ENST00000595756 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 ZNRF2Q8NHG8 242 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 TVP23CQ96ET8 276 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 LINC00479Q96M42 142 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 VAX2Q9UIW0 290 aa12.52□□□□□ -0.41
HOMER3-208ENST00000595756 TRAV34A0A0B4J273 112 aa12.51□□□□□ -0.41
HOMER3-208ENST00000595756 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
HOMER3-208ENST00000595756 BCL2P10415 239 aa12.51□□□□□ -0.41
HOMER3-208ENST00000595756 CCL18P55774 89 aa12.51□□□□□ -0.41
HOMER3-208ENST00000595756 Q86TA4 180 aa12.51□□□□□ -0.41
HOMER3-208ENST00000595756 KCNS1Q96KK3 526 aa12.51□□□□□ -0.41
HOMER3-208ENST00000595756 NBDYA0A0U1RRE5 68 aa12.5□□□□□ -0.41
HOMER3-208ENST00000595756 IBA57Q5T440 356 aaKnown RBP12.5□□□□□ -0.41
HOMER3-208ENST00000595756 SCO2A0A1W2PP80 73 aa12.49□□□□□ -0.41
HOMER3-208ENST00000595756 GCGP01275 180 aa12.49□□□□□ -0.41
HOMER3-208ENST00000595756 LTAP01374 205 aa12.49□□□□□ -0.41
HOMER3-208ENST00000595756 PFN1P07737 140 aaKnown RBP12.49□□□□□ -0.41
HOMER3-208ENST00000595756 TDRG1Q3Y452 100 aa12.49□□□□□ -0.41
HOMER3-208ENST00000595756 COX8CQ7Z4L0 72 aa12.49□□□□□ -0.41
HOMER3-208ENST00000595756 C11orf52Q96A22 123 aa12.49□□□□□ -0.41
HOMER3-208ENST00000595756 LINC00588Q9Y4M8 146 aa12.49□□□□□ -0.41
HOMER3-208ENST00000595756 TRGV11A0A075B6L2 103 aa12.48□□□□□ -0.41
HOMER3-208ENST00000595756 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
HOMER3-208ENST00000595756 C8orf49Q96NF6 230 aa12.48□□□□□ -0.41
HOMER3-208ENST00000595756 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
HOMER3-208ENST00000595756 MUC21Q5SSG8 566 aa12.47□□□□□ -0.41
HOMER3-208ENST00000595756 TMEM183AQ8IXX5 376 aa12.47□□□□□ -0.41
HOMER3-208ENST00000595756 C6orf223Q8N319 242 aa12.47□□□□□ -0.41
HOMER3-208ENST00000595756 ABCA13Q86UQ4 5058 aa12.47□□□□□ -0.41
HOMER3-208ENST00000595756 TRAV26-1A0A087WT03 109 aa12.46□□□□□ -0.41
HOMER3-208ENST00000595756 RBFOX3A6NFN3 312 aa12.46□□□□□ -0.41
HOMER3-208ENST00000595756 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
HOMER3-208ENST00000595756 SDF2L1Q9HCN8 221 aa12.46□□□□□ -0.41
HOMER3-208ENST00000595756 NAGKQ9UJ70 344 aa12.46□□□□□ -0.41
HOMER3-208ENST00000595756 MUC4Q99102 2169 aa12.46□□□□□ -0.42
HOMER3-208ENST00000595756 GAGE12BA1L429 117 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 H3BNG1 76 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 NDUFS6O75380 124 aaKnown RBP12.45□□□□□ -0.42
HOMER3-208ENST00000595756 GAGE7O76087 117 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 GAGE12FP0CL80 117 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 GAGE12GP0CL81 117 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 GAGE12IP0CL82 117 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 ZNF80P51504 273 aaPredicted RBP12.45□□□□□ -0.42
HOMER3-208ENST00000595756 TCL1AP56279 114 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 OR5I1Q13606 314 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 Q6ZQT7 251 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 ZNF575Q86XF7 245 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 BAGE2Q86Y30 109 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 C11orf72Q8NBR9 251 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 MED9Q9NWA0 146 aa12.45□□□□□ -0.42
HOMER3-208ENST00000595756 APOBP04114 4563 aaKnown RBP12.44□□□□□ -0.42
HOMER3-208ENST00000595756 DNAH5Q8TE73 4624 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 HOXA5P20719 270 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 RPL35P42766 123 aaKnown RBP12.44□□□□□ -0.42
HOMER3-208ENST00000595756 ZNF506Q5JVG8 444 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 SMIM12Q96EX1 92 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 SPXQ9BT56 116 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 TP53TG3Q9ULZ0 132 aa12.44□□□□□ -0.42
HOMER3-208ENST00000595756 TMEM250H0YL14 139 aa12.43□□□□□ -0.42
HOMER3-208ENST00000595756 TNP2Q05952 138 aa12.43□□□□□ -0.42
HOMER3-208ENST00000595756 C18orf15Q96N68 181 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms