RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 NDFIP1Q9BT67 221 aa16.11■□□□□ 0.17
LSM4-204ENST00000594828 ACTR3CQ9C0K3 210 aaPredicted RBP16.11■□□□□ 0.17
LSM4-204ENST00000594828 SH3BGRL3Q9H299 93 aa16.11■□□□□ 0.17
LSM4-204ENST00000594828 K7EQM0 130 aa16.1■□□□□ 0.17
LSM4-204ENST00000594828 NXPH4O95158 308 aa16.1■□□□□ 0.17
LSM4-204ENST00000594828 CXorf1O96002 111 aa16.1■□□□□ 0.17
LSM4-204ENST00000594828 NEGR1Q7Z3B1 354 aa16.1■□□□□ 0.17
LSM4-204ENST00000594828 KCNS1Q96KK3 526 aa16.1■□□□□ 0.17
LSM4-204ENST00000594828 SDF2L1Q9HCN8 221 aa16.1■□□□□ 0.17
LSM4-204ENST00000594828 TMEM167BQ9NRX6 74 aa16.1■□□□□ 0.17
LSM4-204ENST00000594828 M0R2P5 195 aa16.09■□□□□ 0.17
LSM4-204ENST00000594828 TYMSP04818 313 aa16.09■□□□□ 0.17
LSM4-204ENST00000594828 SUMO1P63165 101 aaKnown RBP16.09■□□□□ 0.17
LSM4-204ENST00000594828 FXYD6-FXYD2A0A087WZ82 144 aa16.08■□□□□ 0.16
LSM4-204ENST00000594828 BORCS7-ASMTA0A0B4J1R7 106 aa16.08■□□□□ 0.16
LSM4-204ENST00000594828 TRAV4A0A0B4J268 109 aa16.08■□□□□ 0.16
LSM4-204ENST00000594828 RPL7L1Q6DKI1 246 aaKnown RBP16.08■□□□□ 0.16
LSM4-204ENST00000594828 OR4C5Q8NGB2 326 aa16.08■□□□□ 0.16
LSM4-204ENST00000594828 PCNPQ8WW12 178 aaKnown RBP16.08■□□□□ 0.16
LSM4-204ENST00000594828 RNF222A6NCQ9 220 aa16.07■□□□□ 0.16
LSM4-204ENST00000594828 K7EQD1 137 aa16.07■□□□□ 0.16
LSM4-204ENST00000594828 GYPEP15421 78 aa16.07■□□□□ 0.16
LSM4-204ENST00000594828 SRIP30626 198 aa16.07■□□□□ 0.16
LSM4-204ENST00000594828 EPDR1Q9UM22 224 aa16.07■□□□□ 0.16
LSM4-204ENST00000594828 PSG8Q9UQ74 426 aa16.07■□□□□ 0.16
LSM4-204ENST00000594828 ORM1P02763 201 aa16.06■□□□□ 0.16
LSM4-204ENST00000594828 LINC00315P59091 139 aa16.06■□□□□ 0.16
LSM4-204ENST00000594828 SPATA12Q7Z6I5 190 aa16.06■□□□□ 0.16
LSM4-204ENST00000594828 OR2T35Q8NGX2 323 aa16.06■□□□□ 0.16
LSM4-204ENST00000594828 GGTLC3B5MD39 225 aa16.05■□□□□ 0.16
LSM4-204ENST00000594828 TAAR5O14804 337 aa16.05■□□□□ 0.16
LSM4-204ENST00000594828 ZNF80P51504 273 aaPredicted RBP16.05■□□□□ 0.16
LSM4-204ENST00000594828 FLI1Q01543 452 aaPredicted RBP16.05■□□□□ 0.16
LSM4-204ENST00000594828 GCGP01275 180 aa16.04■□□□□ 0.16
LSM4-204ENST00000594828 IGLV2-11P01706 119 aa16.04■□□□□ 0.16
LSM4-204ENST00000594828 PRNTQ86SH4 94 aa16.04■□□□□ 0.16
LSM4-204ENST00000594828 CYB561D1Q8N8Q1 229 aa16.04■□□□□ 0.16
LSM4-204ENST00000594828 A0A1W2PRE2 83 aa16.03■□□□□ 0.16
LSM4-204ENST00000594828 C9JCJ5 164 aa16.03■□□□□ 0.16
LSM4-204ENST00000594828 SMUG1Q53HV7 270 aa16.03■□□□□ 0.16
LSM4-204ENST00000594828 TMEM75Q8N9X5 138 aa16.03■□□□□ 0.16
LSM4-204ENST00000594828 TXNDC17Q9BRA2 123 aa16.03■□□□□ 0.16
LSM4-204ENST00000594828 C11orf21Q9P2W6 132 aa16.03■□□□□ 0.16
LSM4-204ENST00000594828 FBLL1A6NHQ2 334 aaKnown RBP16.02■□□□□ 0.16
LSM4-204ENST00000594828 PFN1P07737 140 aaKnown RBP16.02■□□□□ 0.16
LSM4-204ENST00000594828 ZFP69Q49AA0 526 aa16.02■□□□□ 0.16
LSM4-204ENST00000594828 TRAV9-2A0A087WT02 112 aa16.01■□□□□ 0.15
LSM4-204ENST00000594828 CTXND1A0A1B0GTU2 59 aa16.01■□□□□ 0.15
LSM4-204ENST00000594828 ZNF726P1Q15940 193 aa16.01■□□□□ 0.15
LSM4-204ENST00000594828 RGS21Q2M5E4 152 aa16.01■□□□□ 0.15
LSM4-204ENST00000594828 ZNF876PQ49A33 203 aa16.01■□□□□ 0.15
LSM4-204ENST00000594828 SAPCD1Q5SSQ6 148 aa16.01■□□□□ 0.15
LSM4-204ENST00000594828 Q6ZRN7 208 aaPredicted RBP16.01■□□□□ 0.15
LSM4-204ENST00000594828 PCLOQ9Y6V0 5065 aa16.01■□□□□ 0.15
LSM4-204ENST00000594828 LY96Q9Y6Y9 160 aa16■□□□□ 0.15
LSM4-204ENST00000594828 CDK2AP2O75956 126 aa15.99■□□□□ 0.15
LSM4-204ENST00000594828 AKR1C8PQ5T2L2 129 aa15.99■□□□□ 0.15
LSM4-204ENST00000594828 LINC00479Q96M42 142 aa15.99■□□□□ 0.15
LSM4-204ENST00000594828 RYR1P21817 5038 aa15.99■□□□□ 0.15
LSM4-204ENST00000594828 LOC100131303A0A0U1RQF7 123 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 G3V3Q6 166 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 IFNA7P01567 189 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 GATA1P15976 413 aaPredicted RBP15.98■□□□□ 0.15
LSM4-204ENST00000594828 KRTAP10-2P60368 255 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 UBE2G2P60604 165 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 SH2D6Q7Z4S9 175 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 WFDC10BQ8IUB3 73 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 TNFRSF18Q9Y5U5 241 aa15.98■□□□□ 0.15
LSM4-204ENST00000594828 TRAV34A0A0B4J273 112 aa15.97■□□□□ 0.15
LSM4-204ENST00000594828 ARPC5O15511 151 aa15.97■□□□□ 0.15
LSM4-204ENST00000594828 C9orf85Q96MD7 179 aa15.97■□□□□ 0.15
LSM4-204ENST00000594828 K7EP13 123 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 RS1O15537 224 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 CIDEAO60543 219 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 EVI2AP22794 236 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 PPT1P50897 306 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 FGF8P55075 233 aaPredicted RBP15.96■□□□□ 0.15
LSM4-204ENST00000594828 CFAP126Q5VTH2 177 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 NFE4Q86UQ8 179 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 NHLRC2Q8NBF2 726 aa15.96■□□□□ 0.15
LSM4-204ENST00000594828 NKX6-2Q9C056 277 aaPredicted RBP15.96■□□□□ 0.15
LSM4-204ENST00000594828 DPPA3Q6W0C5 159 aa15.95■□□□□ 0.14
LSM4-204ENST00000594828 PTH2Q96A98 100 aa15.95■□□□□ 0.14
LSM4-204ENST00000594828 ARL2-SNX15V9GYD0 113 aa15.95■□□□□ 0.14
LSM4-204ENST00000594828 PGPEP1LA6NFU8 196 aa15.94■□□□□ 0.14
LSM4-204ENST00000594828 FAM74A7A6NL05 159 aa15.94■□□□□ 0.14
LSM4-204ENST00000594828 DNAH10OSP0CZ25 163 aa15.94■□□□□ 0.14
LSM4-204ENST00000594828 RNASE3P12724 160 aaKnown RBP15.94■□□□□ 0.14
LSM4-204ENST00000594828 SLC25A29Q8N8R3 303 aa15.94■□□□□ 0.14
LSM4-204ENST00000594828 CYTL1Q9NRR1 136 aa15.94■□□□□ 0.14
LSM4-204ENST00000594828 IGHV3-73A0A0B4J1V6 119 aa15.93■□□□□ 0.14
LSM4-204ENST00000594828 FABP5P3A8MUU1 101 aa15.93■□□□□ 0.14
LSM4-204ENST00000594828 PEX7O00628 323 aa15.93■□□□□ 0.14
LSM4-204ENST00000594828 ZNF506Q5JVG8 444 aa15.93■□□□□ 0.14
LSM4-204ENST00000594828 HIST1H2BAQ96A08 127 aa15.93■□□□□ 0.14
LSM4-204ENST00000594828 PRADC1Q9BSG0 188 aa15.93■□□□□ 0.14
LSM4-204ENST00000594828 LRP1BQ9NZR2 4599 aa15.92■□□□□ 0.14
LSM4-204ENST00000594828 IGKV3D-20A0A0C4DH25 116 aa15.92■□□□□ 0.14
LSM4-204ENST00000594828 TRBV6-4A0A1B0GX49 114 aa15.92■□□□□ 0.14
LSM4-204ENST00000594828 EREGO14944 169 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms