RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 NEU1Q99519 415 aa12.23□□□□□ -0.45
LTBP4-209ENST00000594116 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
LTBP4-209ENST00000594116 FRAS1Q86XX4 4008 aa12.22□□□□□ -0.45
LTBP4-209ENST00000594116 OCC1Q8TAD7 63 aa12.22□□□□□ -0.45
LTBP4-209ENST00000594116 PYGO2Q9BRQ0 406 aa12.22□□□□□ -0.45
LTBP4-209ENST00000594116 X6R8D5 127 aa12.22□□□□□ -0.45
LTBP4-209ENST00000594116 KMT2AQ03164 3969 aa12.22□□□□□ -0.45
LTBP4-209ENST00000594116 FABP5P3A8MUU1 101 aa12.21□□□□□ -0.45
LTBP4-209ENST00000594116 FAM162BQ5T6X4 162 aa12.21□□□□□ -0.45
LTBP4-209ENST00000594116 C11orf45Q8TAV5 145 aa12.21□□□□□ -0.45
LTBP4-209ENST00000594116 TMEM208Q9BTX3 173 aa12.21□□□□□ -0.45
LTBP4-209ENST00000594116 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 SMIM9A6NGZ8 99 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 K7EN84 100 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 SH2D1AO60880 128 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 MGST1P10620 155 aaKnown RBP12.2□□□□□ -0.46
LTBP4-209ENST00000594116 TDRG1Q3Y452 100 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 LINC01551Q86U37 167 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 LINC01587Q99440 93 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 BIN3Q9NQY0 253 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 NAT8Q9UHE5 227 aa12.2□□□□□ -0.46
LTBP4-209ENST00000594116 IGHV3OR16-12A0A075B7B8 117 aa12.19□□□□□ -0.46
LTBP4-209ENST00000594116 IGHV1OR15-1A0A075B7D0 117 aa12.19□□□□□ -0.46
LTBP4-209ENST00000594116 C19orf71A6NCJ1 209 aa12.19□□□□□ -0.46
LTBP4-209ENST00000594116 ADCYAP1P18509 176 aa12.19□□□□□ -0.46
LTBP4-209ENST00000594116 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
LTBP4-209ENST00000594116 TMEM241Q24JQ0 296 aa12.19□□□□□ -0.46
LTBP4-209ENST00000594116 RPL23P62829 140 aaKnown RBP12.18□□□□□ -0.46
LTBP4-209ENST00000594116 OR5I1Q13606 314 aa12.18□□□□□ -0.46
LTBP4-209ENST00000594116 ANXA2RQ3ZCQ2 193 aa12.18□□□□□ -0.46
LTBP4-209ENST00000594116 PRR27Q6MZM9 219 aa12.18□□□□□ -0.46
LTBP4-209ENST00000594116 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
LTBP4-209ENST00000594116 ZNF705GA8MUZ8 300 aaPredicted RBP12.17□□□□□ -0.46
LTBP4-209ENST00000594116 MIFP14174 115 aa12.17□□□□□ -0.46
LTBP4-209ENST00000594116 NDUFA5Q16718 116 aa12.17□□□□□ -0.46
LTBP4-209ENST00000594116 RRN3P1Q2M238 152 aa12.17□□□□□ -0.46
LTBP4-209ENST00000594116 LINC01559Q495D7 138 aa12.17□□□□□ -0.46
LTBP4-209ENST00000594116 MUC21Q5SSG8 566 aa12.17□□□□□ -0.46
LTBP4-209ENST00000594116 FAM159AQ6UWV7 190 aa12.17□□□□□ -0.46
LTBP4-209ENST00000594116 Q8NAQ8 132 aa12.17□□□□□ -0.46
LTBP4-209ENST00000594116 IGKV3D-20A0A0C4DH25 116 aa12.16□□□□□ -0.46
LTBP4-209ENST00000594116 PRM2P04554 102 aa12.16□□□□□ -0.46
LTBP4-209ENST00000594116 FAM231DQ6ZW35 169 aa12.16□□□□□ -0.46
LTBP4-209ENST00000594116 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
LTBP4-209ENST00000594116 KCNS1Q96KK3 526 aa12.16□□□□□ -0.46
LTBP4-209ENST00000594116 SEC11CQ9BY50 192 aa12.16□□□□□ -0.46
LTBP4-209ENST00000594116 NAGKQ9UJ70 344 aa12.16□□□□□ -0.46
LTBP4-209ENST00000594116 KRBOX1C9JBD0 128 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 F8W036 122 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 DEFB4AO15263 64 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 TYMSP04818 313 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 AZU1P20160 251 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 TCTAP57738 103 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 C10orf91Q5T1B1 145 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 ZNF493Q6ZR52 646 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 TMEM263Q8WUH6 116 aaKnown RBP12.15□□□□□ -0.46
LTBP4-209ENST00000594116 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 TP53TG3Q9ULZ0 132 aa12.15□□□□□ -0.46
LTBP4-209ENST00000594116 TRGV11A0A075B6L2 103 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 IGHV4-28A0A0C4DH34 117 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 CBY3A6NI87 242 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 PNRC1Q12796 327 aaPredicted RBP12.14□□□□□ -0.47
LTBP4-209ENST00000594116 ADIRFQ15847 76 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
LTBP4-209ENST00000594116 ZNF575Q86XF7 245 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 SLC7A5P1Q8MH63 180 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 C11orf72Q8NBR9 251 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 DAZAP1Q96EP5 407 aaKnown RBP12.14□□□□□ -0.47
LTBP4-209ENST00000594116 C16orf74Q96GX8 76 aa12.14□□□□□ -0.47
LTBP4-209ENST00000594116 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 B4DEV8 164 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 M0R036 132 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 P01737 135 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 ORM1P02763 201 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 CXCL1P09341 107 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 HTN1P15515 57 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 DNLZQ5SXM8 178 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 NUDT11Q96G61 164 aa12.13□□□□□ -0.47
LTBP4-209ENST00000594116 RNASE7Q9H1E1 156 aaKnown RBP12.13□□□□□ -0.47
LTBP4-209ENST00000594116 CARHSP1Q9Y2V2 147 aaKnown RBP12.13□□□□□ -0.47
LTBP4-209ENST00000594116 IGHV3-16A0A0C4DH30 117 aa12.12□□□□□ -0.47
LTBP4-209ENST00000594116 GNRH2O43555 120 aa12.12□□□□□ -0.47
LTBP4-209ENST00000594116 RPL19P84098 196 aaKnown RBP12.12□□□□□ -0.47
LTBP4-209ENST00000594116 OSTCQ9NRP0 149 aa12.12□□□□□ -0.47
LTBP4-209ENST00000594116 TMEM189A5PLL7 270 aa12.11□□□□□ -0.47
LTBP4-209ENST00000594116 TCL1AP56279 114 aa12.11□□□□□ -0.47
LTBP4-209ENST00000594116 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
LTBP4-209ENST00000594116 RPP21Q9H633 154 aaKnown RBP12.11□□□□□ -0.47
LTBP4-209ENST00000594116 VPS13DQ5THJ4 4388 aa12.1□□□□□ -0.47
LTBP4-209ENST00000594116 ERVFC1-1P60608 527 aa12.1□□□□□ -0.47
LTBP4-209ENST00000594116 RPS20P60866 119 aaKnown RBP12.1□□□□□ -0.47
LTBP4-209ENST00000594116 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
LTBP4-209ENST00000594116 SFRP2Q96HF1 295 aa12.1□□□□□ -0.47
LTBP4-209ENST00000594116 MDFICQ9P1T7 246 aa12.1□□□□□ -0.47
LTBP4-209ENST00000594116 TMSB15BA0A087X1C1 80 aa12.09□□□□□ -0.47
LTBP4-209ENST00000594116 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
LTBP4-209ENST00000594116 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms