RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MORN5Q5VZ52 161 aa14.61□□□□□ -0.07
LSM4-203ENST00000593829 EBLN2Q6P2I7 272 aa14.61□□□□□ -0.07
LSM4-203ENST00000593829 DEFB125Q8N687 156 aa14.61□□□□□ -0.07
LSM4-203ENST00000593829 GLMPQ8WWB7 406 aa14.61□□□□□ -0.07
LSM4-203ENST00000593829 KLF12Q9Y4X4 402 aa14.61□□□□□ -0.07
LSM4-203ENST00000593829 COX11Q9Y6N1 276 aa14.61□□□□□ -0.07
LSM4-203ENST00000593829 M0R2Z0 102 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 CRXO43186 299 aaPredicted RBP14.6□□□□□ -0.07
LSM4-203ENST00000593829 COX7A2P2O60397 106 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 C10orf113Q5VZT2 155 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 STXBP6Q8NFX7 210 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 FXYD5Q96DB9 178 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 WFDC10AQ9H1F0 79 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 TRAV2A0A0B4J234 112 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 TRAV5A0A0B4J249 113 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 UBE2V1Q13404 147 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 WFDC3Q8IUB2 231 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 ZNF738Q8NE65 137 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 OR1B1Q8NGR6 318 aa14.6□□□□□ -0.07
LSM4-203ENST00000593829 K7EP13 123 aa14.59□□□□□ -0.07
LSM4-203ENST00000593829 S100A7P31151 101 aa14.59□□□□□ -0.07
LSM4-203ENST00000593829 FAM110AQ9BQ89 295 aa14.59□□□□□ -0.07
LSM4-203ENST00000593829 CMC4P56277 68 aaPredicted RBP14.58□□□□□ -0.07
LSM4-203ENST00000593829 PLP1P60201 277 aa14.58□□□□□ -0.07
LSM4-203ENST00000593829 LEMD1Q68G75 181 aa14.58□□□□□ -0.07
LSM4-203ENST00000593829 PATE2Q6UY27 113 aa14.58□□□□□ -0.07
LSM4-203ENST00000593829 SIGLEC15Q6ZMC9 328 aa14.58□□□□□ -0.07
LSM4-203ENST00000593829 NHLRC2Q8NBF2 726 aa14.58□□□□□ -0.07
LSM4-203ENST00000593829 CHCHD1Q96BP2 118 aaKnown RBP14.58□□□□□ -0.07
LSM4-203ENST00000593829 LINC00479Q96M42 142 aa14.58□□□□□ -0.07
LSM4-203ENST00000593829 ZNF492Q9P255 531 aa14.58□□□□□ -0.07
LSM4-203ENST00000593829 CCL25O15444 150 aa14.58□□□□□ -0.08
LSM4-203ENST00000593829 PTTG1IPP53801 180 aa14.58□□□□□ -0.08
LSM4-203ENST00000593829 ODF3L2Q3SX64 289 aa14.58□□□□□ -0.08
LSM4-203ENST00000593829 ST20Q9HBF5 79 aa14.58□□□□□ -0.08
LSM4-203ENST00000593829 TGP01266 2768 aa14.58□□□□□ -0.08
LSM4-203ENST00000593829 HIGD1CA8MV81 97 aa14.57□□□□□ -0.08
LSM4-203ENST00000593829 ASCL2Q99929 193 aa14.57□□□□□ -0.08
LSM4-203ENST00000593829 TMEM70Q9BUB7 260 aa14.57□□□□□ -0.08
LSM4-203ENST00000593829 MLST8Q9BVC4 326 aa14.57□□□□□ -0.08
LSM4-203ENST00000593829 EPDR1Q9UM22 224 aa14.57□□□□□ -0.08
LSM4-203ENST00000593829 PYYP10082 97 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 GFRA4Q9GZZ7 299 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 HIGD1AQ9Y241 93 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 K7EQG2 157 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 HBBP68871 147 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 RNASEKQ6P5S7 137 aaKnown RBP14.56□□□□□ -0.08
LSM4-203ENST00000593829 S100A7AQ86SG5 101 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 SBSPONQ8IVN8 264 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 DCANP1Q8TF63 244 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 URB1-AS1Q96HZ7 61 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 GPR82Q96P67 336 aa14.56□□□□□ -0.08
LSM4-203ENST00000593829 FAM231BA6NCW3 169 aa14.55□□□□□ -0.08
LSM4-203ENST00000593829 NHLRC4P0CG21 123 aaPredicted RBP14.55□□□□□ -0.08
LSM4-203ENST00000593829 HINT1P49773 126 aaPredicted RBP14.55□□□□□ -0.08
LSM4-203ENST00000593829 RPS20P60866 119 aaKnown RBP14.55□□□□□ -0.08
LSM4-203ENST00000593829 MAJINQ3KP22 176 aa14.55□□□□□ -0.08
LSM4-203ENST00000593829 ATOH7Q8N100 152 aa14.55□□□□□ -0.08
LSM4-203ENST00000593829 SLC25A39Q9BZJ4 359 aaPredicted RBP14.55□□□□□ -0.08
LSM4-203ENST00000593829 RPP21Q9H633 154 aaKnown RBP14.54□□□□□ -0.08
LSM4-203ENST00000593829 MAP6D1Q9H9H5 199 aa14.54□□□□□ -0.08
LSM4-203ENST00000593829 TRAV34A0A0B4J273 112 aa14.54□□□□□ -0.08
LSM4-203ENST00000593829 A8MWL6 223 aa14.54□□□□□ -0.08
LSM4-203ENST00000593829 OR5AL1P0C617 328 aa14.54□□□□□ -0.08
LSM4-203ENST00000593829 LINC00322Q6ZN03 302 aaPredicted RBP14.54□□□□□ -0.08
LSM4-203ENST00000593829 C19orf71A6NCJ1 209 aa14.53□□□□□ -0.08
LSM4-203ENST00000593829 RBMY1BA6NDE4 496 aaKnown RBP14.53□□□□□ -0.08
LSM4-203ENST00000593829 RBMY1EA6NEQ0 496 aaKnown RBP14.53□□□□□ -0.08
LSM4-203ENST00000593829 RBMY1DP0C7P1 496 aaKnown RBP14.53□□□□□ -0.08
LSM4-203ENST00000593829 PCP4P48539 62 aa14.53□□□□□ -0.08
LSM4-203ENST00000593829 APRG1Q8IVJ8 170 aa14.53□□□□□ -0.08
LSM4-203ENST00000593829 FMC1Q96HJ9 113 aa14.53□□□□□ -0.08
LSM4-203ENST00000593829 SHANK2-AS3Q9BTD1 123 aa14.53□□□□□ -0.08
LSM4-203ENST00000593829 H3BRN7 92 aa14.53□□□□□ -0.08
LSM4-203ENST00000593829 RBX1P62877 108 aa14.52□□□□□ -0.09
LSM4-203ENST00000593829 LINC00305Q7Z4B0 112 aa14.52□□□□□ -0.09
LSM4-203ENST00000593829 LTAP01374 205 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 CAMPP49913 170 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 DEFB131AP59861 70 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 SPATA12Q7Z6I5 190 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 C5orf17Q8NAS9 161 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 NDFIP1Q9BT67 221 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 RNF24Q9Y225 148 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 LOC102724200A0A096LPH7 203 aaPredicted RBP14.51□□□□□ -0.09
LSM4-203ENST00000593829 NPIPB6E9PJ23 425 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 SYS1-DBNDD2H3BUS1 97 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 SLC25A5P05141 298 aaKnown RBP14.51□□□□□ -0.09
LSM4-203ENST00000593829 PRR27Q6MZM9 219 aa14.51□□□□□ -0.09
LSM4-203ENST00000593829 SSBP4Q9BWG4 385 aaPredicted RBP14.51□□□□□ -0.09
LSM4-203ENST00000593829 ZNF688P0C7X2 276 aa14.5□□□□□ -0.09
LSM4-203ENST00000593829 SNRPD3P62318 126 aaKnown RBP14.5□□□□□ -0.09
LSM4-203ENST00000593829 ANKRD39Q53RE8 183 aa14.5□□□□□ -0.09
LSM4-203ENST00000593829 COL7A1Q02388 2944 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 IGHV1-24A0A0C4DH33 117 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 CDKN1BP46527 198 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 GNG5P63218 68 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 PET117Q6UWS5 81 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 DNAH9Q9NYC9 4486 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 TRBV6-1A0A0K0K1D8 114 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 PGPA6NDG6 321 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms