RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 BAGE2Q86Y30 109 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 NHLRC2Q8NBF2 726 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 PCNPQ8WW12 178 aaKnown RBP10.63□□□□□ -0.71
DDX39A-221ENST00000593026 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 TOR2AQ5JU69 321 aa10.62□□□□□ -0.71
DDX39A-221ENST00000593026 ZNF506Q5JVG8 444 aa10.62□□□□□ -0.71
DDX39A-221ENST00000593026 FAM162BQ5T6X4 162 aa10.62□□□□□ -0.71
DDX39A-221ENST00000593026 EIF5A2Q9GZV4 153 aaKnown RBP10.62□□□□□ -0.71
DDX39A-221ENST00000593026 MDFICQ9P1T7 246 aa10.62□□□□□ -0.71
DDX39A-221ENST00000593026 C11orf21Q9P2W6 132 aa10.62□□□□□ -0.71
DDX39A-221ENST00000593026 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-221ENST00000593026 GNRH2O43555 120 aa10.61□□□□□ -0.71
DDX39A-221ENST00000593026 SH2D1AO60880 128 aa10.61□□□□□ -0.71
DDX39A-221ENST00000593026 TYMSP04818 313 aa10.61□□□□□ -0.71
DDX39A-221ENST00000593026 CENPWQ5EE01 88 aa10.61□□□□□ -0.71
DDX39A-221ENST00000593026 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
DDX39A-221ENST00000593026 DEFB131BA0A096LNP1 70 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 GAGE12BA1L429 117 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 TMEM250H0YL14 139 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 GAGE7O76087 117 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 HTN3P15516 51 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 GNG4P50150 75 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 CRIP1P50238 77 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 ZNF674Q2M3X9 581 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 Q6ZTI0 123 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 MLST8Q9BVC4 326 aa10.6□□□□□ -0.71
DDX39A-221ENST00000593026 CSMD3Q7Z407 3707 aa10.59□□□□□ -0.71
DDX39A-221ENST00000593026 TRGV1A0A0A0MS02 117 aa10.59□□□□□ -0.71
DDX39A-221ENST00000593026 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
DDX39A-221ENST00000593026 ORM1P02763 201 aa10.59□□□□□ -0.71
DDX39A-221ENST00000593026 LINC00612Q8N6U2 182 aa10.59□□□□□ -0.71
DDX39A-221ENST00000593026 SPXQ9BT56 116 aa10.59□□□□□ -0.71
DDX39A-221ENST00000593026 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
DDX39A-221ENST00000593026 IGKV3D-20A0A0C4DH25 116 aa10.58□□□□□ -0.72
DDX39A-221ENST00000593026 B4DEV8 164 aa10.58□□□□□ -0.72
DDX39A-221ENST00000593026 SPINK4O60575 86 aa10.58□□□□□ -0.72
DDX39A-221ENST00000593026 ATP5G1P05496 136 aa10.58□□□□□ -0.72
DDX39A-221ENST00000593026 PRR27Q6MZM9 219 aa10.58□□□□□ -0.72
DDX39A-221ENST00000593026 SMIM12Q96EX1 92 aa10.58□□□□□ -0.72
DDX39A-221ENST00000593026 MRPL16Q9NX20 251 aaKnown RBP10.58□□□□□ -0.72
DDX39A-221ENST00000593026 TRBV20OR9-2A0A075B6H5 130 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 TRGV2A0A075B6R0 118 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 IGLL5B9A064 214 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 M0R036 132 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 MGST1P10620 155 aaKnown RBP10.57□□□□□ -0.72
DDX39A-221ENST00000593026 CEBPGP53567 150 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 RAB14P61106 215 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 LGALS9BQ3B8N2 356 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 PARLQ9H300 379 aa10.57□□□□□ -0.72
DDX39A-221ENST00000593026 KMT2CQ8NEZ4 4911 aaKnown RBP10.56□□□□□ -0.72
DDX39A-221ENST00000593026 KRBOX1C9JBD0 128 aa10.56□□□□□ -0.72
DDX39A-221ENST00000593026 NDUFS6O75380 124 aaKnown RBP10.56□□□□□ -0.72
DDX39A-221ENST00000593026 IGLV2-8P01709 118 aa10.56□□□□□ -0.72
DDX39A-221ENST00000593026 S100A4P26447 101 aaKnown RBP10.56□□□□□ -0.72
DDX39A-221ENST00000593026 ASIPP42127 132 aa10.56□□□□□ -0.72
DDX39A-221ENST00000593026 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
DDX39A-221ENST00000593026 PGPEP1LA6NFU8 196 aa10.55□□□□□ -0.72
DDX39A-221ENST00000593026 C9JCJ5 164 aa10.55□□□□□ -0.72
DDX39A-221ENST00000593026 F5H768 121 aa10.55□□□□□ -0.72
DDX39A-221ENST00000593026 M0R2P5 195 aa10.55□□□□□ -0.72
DDX39A-221ENST00000593026 OR5I1Q13606 314 aa10.55□□□□□ -0.72
DDX39A-221ENST00000593026 C18orf15Q96N68 181 aa10.55□□□□□ -0.72
DDX39A-221ENST00000593026 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
DDX39A-221ENST00000593026 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
DDX39A-221ENST00000593026 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
DDX39A-221ENST00000593026 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
DDX39A-221ENST00000593026 TCTAP57738 103 aa10.54□□□□□ -0.72
DDX39A-221ENST00000593026 RASL10AQ92737 203 aa10.54□□□□□ -0.72
DDX39A-221ENST00000593026 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
DDX39A-221ENST00000593026 BIN3Q9NQY0 253 aa10.54□□□□□ -0.72
DDX39A-221ENST00000593026 GRIFINA4D1Z8 144 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 IFITM2Q01629 132 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 PEA15Q15121 130 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 DNLZQ5SXM8 178 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 DAZAP1Q96EP5 407 aaKnown RBP10.53□□□□□ -0.72
DDX39A-221ENST00000593026 FAM210BQ96KR6 192 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 SMIM7Q9BQ49 75 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 IL36BQ9NZH7 164 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 TENM2Q9NT68 2774 aa10.53□□□□□ -0.72
DDX39A-221ENST00000593026 H3BVH4 76 aa10.52□□□□□ -0.73
DDX39A-221ENST00000593026 RPL19P84098 196 aaKnown RBP10.52□□□□□ -0.73
DDX39A-221ENST00000593026 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
DDX39A-221ENST00000593026 TMEM88Q6PEY1 159 aa10.52□□□□□ -0.73
DDX39A-221ENST00000593026 NDUFAF3Q9BU61 184 aa10.52□□□□□ -0.73
DDX39A-221ENST00000593026 C19orf71A6NCJ1 209 aa10.51□□□□□ -0.73
DDX39A-221ENST00000593026 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
DDX39A-221ENST00000593026 ARMS2P0C7Q2 107 aa10.51□□□□□ -0.73
DDX39A-221ENST00000593026 HOXA5P20719 270 aa10.51□□□□□ -0.73
DDX39A-221ENST00000593026 SRSF3P84103 164 aaKnown RBP10.51□□□□□ -0.73
DDX39A-221ENST00000593026 CLLU1Q5K131 121 aa10.51□□□□□ -0.73
DDX39A-221ENST00000593026 OCC1Q8TAD7 63 aa10.51□□□□□ -0.73
DDX39A-221ENST00000593026 SMDT1Q9H4I9 107 aa10.51□□□□□ -0.73
DDX39A-221ENST00000593026 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
DDX39A-221ENST00000593026 P01737 135 aa10.5□□□□□ -0.73
DDX39A-221ENST00000593026 CXCL1P09341 107 aa10.5□□□□□ -0.73
DDX39A-221ENST00000593026 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms