RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 PMVKQ15126 192 aa10.01□□□□□ -0.81
DNMT1-228ENST00000592705 GHRHP01286 108 aa10.01□□□□□ -0.81
DNMT1-228ENST00000592705 TAL2Q16559 108 aa10.01□□□□□ -0.81
DNMT1-228ENST00000592705 GP9P14770 177 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 C17orf77Q96MU5 243 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 C2orf82Q6UX34 121 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 WFDC11Q8NEX6 87 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 OR11H6Q8NGC7 330 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 NPC2P61916 151 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 NEGR1Q7Z3B1 354 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 TMEM86BQ8N661 226 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 SMIM2Q9BVW6 85 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 DOPEY1Q5JWR5 2465 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 H3BUA1 57 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 HLA-DRB4P13762 266 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 ZFP36P26651 326 aaKnown RBP10□□□□□ -0.81
DNMT1-228ENST00000592705 LINC00158P58513 81 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 HLA-DRB4X5D2U9 266 aa10□□□□□ -0.81
DNMT1-228ENST00000592705 C2orf16Q68DN1 1984 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 SPXQ9BT56 116 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
DNMT1-228ENST00000592705 K7EP13 123 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 PATE2Q6UY27 113 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 F8W1H4 67 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 IGHV4-38-2P0DP08 117 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 C20orf78Q9BR46 151 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 A0A1W2PPM0 123 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 RBAKDNA6NC62 111 aa9.99□□□□□ -0.81
DNMT1-228ENST00000592705 F8VRH5 84 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 INS-IGF2F8WCM5 200 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 CKS1BP61024 79 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 HIST2H2BCQ6DN03 193 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 CEND1Q8N111 149 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 CRIP3Q6Q6R5 217 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 I3L3M4 83 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 MORN5Q5VZ52 161 aa9.98□□□□□ -0.81
DNMT1-228ENST00000592705 MRPL53Q96EL3 112 aaKnown RBP9.98□□□□□ -0.81
DNMT1-228ENST00000592705 I3L2K1 104 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 MYCNOSP40205 109 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 FOXE3Q13461 319 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 SLC25A20O43772 301 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 P0C879 139 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 EGR2P11161 476 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-228ENST00000592705 TEX48A0A1B0GUV7 120 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 KMT2EQ8IZD2 1858 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 RHODO00212 210 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 HOXB4P17483 251 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-228ENST00000592705 DKK2Q9UBU2 259 aa9.97□□□□□ -0.81
DNMT1-228ENST00000592705 TMEM131Q92545 1883 aa9.96□□□□□ -0.81
DNMT1-228ENST00000592705 LGALS1P09382 135 aaKnown RBP9.96□□□□□ -0.81
DNMT1-228ENST00000592705 PIFOQ8TCI5 191 aa9.96□□□□□ -0.81
DNMT1-228ENST00000592705 IGHV1OR15-1A0A075B7D0 117 aa9.96□□□□□ -0.81
DNMT1-228ENST00000592705 C9JAW5 83 aa9.96□□□□□ -0.81
DNMT1-228ENST00000592705 ODF3L1Q8IXM7 274 aa9.96□□□□□ -0.82
DNMT1-228ENST00000592705 NPBQ8NG41 125 aa9.96□□□□□ -0.82
DNMT1-228ENST00000592705 OVOL2Q9BRP0 275 aa9.96□□□□□ -0.82
DNMT1-228ENST00000592705 FASNP49327 2511 aaKnown RBP9.96□□□□□ -0.82
DNMT1-228ENST00000592705 DYNAPQ8N1N2 210 aa9.96□□□□□ -0.82
DNMT1-228ENST00000592705 SPINK8P0C7L1 97 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 DEFB125Q8N687 156 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 C1orf159Q96HA4 380 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 K7EMI3 77 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 LEPROTO15243 131 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 TDRG1Q3Y452 100 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 Q6ZPA2 131 aa9.95□□□□□ -0.82
DNMT1-228ENST00000592705 CENPVL3A0A0U1RRI6 287 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 C19orf84I3L1E1 186 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 K7EIM0 57 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 SRSF2Q01130 221 aaKnown RBP9.94□□□□□ -0.82
DNMT1-228ENST00000592705 SPINK13Q1W4C9 94 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 HOXD3P31249 432 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-228ENST00000592705 BOD1L2Q8IYS8 172 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 AGPAT4-IT1Q9H0P7 198 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 IGKV1-17P01599 117 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 LINC01545Q5VT33 79 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 PHLDA1Q8WV24 401 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-228ENST00000592705 RITA1Q96K30 269 aa9.94□□□□□ -0.82
DNMT1-228ENST00000592705 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 IGLV2-23P01705 113 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 HLA-DMBP28068 263 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 CDKN1BP46527 198 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 IGKV1OR2-108A0A075B7D4 117 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 CCL18P55774 89 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 CFHR4Q92496 578 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 KLK9Q9UKQ9 250 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 JMJD1CQ15652 2540 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 PAX4O43316 350 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 INSL3P51460 131 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 ZNF493Q6ZR52 646 aa9.93□□□□□ -0.82
DNMT1-228ENST00000592705 PPDPFLQ8WWR9 84 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms