RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 SOHLH1Q5JUK2 328 aa13.89□□□□□ -0.19
CIRBP-239ENST00000592467 IQCF2Q8IXL9 164 aa13.89□□□□□ -0.19
CIRBP-239ENST00000592467 ZNF479Q96JC4 524 aa13.89□□□□□ -0.19
CIRBP-239ENST00000592467 PRO0255Q9UI72 69 aa13.89□□□□□ -0.19
CIRBP-239ENST00000592467 NAGKQ9UJ70 344 aa13.89□□□□□ -0.19
CIRBP-239ENST00000592467 PSG8Q9UQ74 426 aa13.89□□□□□ -0.19
CIRBP-239ENST00000592467 RYR1P21817 5038 aa13.89□□□□□ -0.19
CIRBP-239ENST00000592467 A0A1W2PRE2 83 aa13.88□□□□□ -0.19
CIRBP-239ENST00000592467 TAAR5O14804 337 aa13.88□□□□□ -0.19
CIRBP-239ENST00000592467 PAX4O43316 350 aa13.88□□□□□ -0.19
CIRBP-239ENST00000592467 SFTA3P0C7M3 94 aa13.88□□□□□ -0.19
CIRBP-239ENST00000592467 C6orf223Q8N319 242 aa13.88□□□□□ -0.19
CIRBP-239ENST00000592467 TNP2Q05952 138 aa13.87□□□□□ -0.19
CIRBP-239ENST00000592467 CYB561D1Q8N8Q1 229 aa13.87□□□□□ -0.19
CIRBP-239ENST00000592467 TMEM75Q8N9X5 138 aa13.87□□□□□ -0.19
CIRBP-239ENST00000592467 OR11H4Q8NGC9 324 aa13.87□□□□□ -0.19
CIRBP-239ENST00000592467 HHLA3Q9XRX5 114 aa13.87□□□□□ -0.19
CIRBP-239ENST00000592467 FLI1Q01543 452 aaPredicted RBP13.86□□□□□ -0.19
CIRBP-239ENST00000592467 LINC00479Q96M42 142 aa13.86□□□□□ -0.19
CIRBP-239ENST00000592467 PCLOQ9Y6V0 5065 aa13.85□□□□□ -0.19
CIRBP-239ENST00000592467 M0R2P5 195 aa13.85□□□□□ -0.19
CIRBP-239ENST00000592467 FGF8P55075 233 aaPredicted RBP13.85□□□□□ -0.19
CIRBP-239ENST00000592467 SLAQ13239 276 aa13.85□□□□□ -0.19
CIRBP-239ENST00000592467 KCNRGQ8N5I3 272 aa13.85□□□□□ -0.19
CIRBP-239ENST00000592467 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
CIRBP-239ENST00000592467 ICOSQ9Y6W8 199 aa13.85□□□□□ -0.19
CIRBP-239ENST00000592467 FAM74A7A6NL05 159 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 K7EQM0 130 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 GCGP01275 180 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 ZNF345Q14585 488 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 AKR1C8PQ5T2L2 129 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 KCNS1Q96KK3 526 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 NDFIP1Q9BT67 221 aa13.84□□□□□ -0.19
CIRBP-239ENST00000592467 TRAV4A0A0B4J268 109 aa13.83□□□□□ -0.2
CIRBP-239ENST00000592467 PFN1P07737 140 aaKnown RBP13.83□□□□□ -0.2
CIRBP-239ENST00000592467 UBE2G2P60604 165 aa13.83□□□□□ -0.2
CIRBP-239ENST00000592467 LRP1BQ9NZR2 4599 aa13.82□□□□□ -0.2
CIRBP-239ENST00000592467 TRAV34A0A0B4J273 112 aa13.82□□□□□ -0.2
CIRBP-239ENST00000592467 TRGV4A0A0C4DH28 118 aa13.82□□□□□ -0.2
CIRBP-239ENST00000592467 A0A1W2PPQ1 181 aa13.82□□□□□ -0.2
CIRBP-239ENST00000592467 FBLL1A6NHQ2 334 aaKnown RBP13.82□□□□□ -0.2
CIRBP-239ENST00000592467 SMUG1Q53HV7 270 aa13.82□□□□□ -0.2
CIRBP-239ENST00000592467 LYPD5Q6UWN5 251 aa13.82□□□□□ -0.2
CIRBP-239ENST00000592467 MAP1LC3B2A6NCE7 125 aa13.81□□□□□ -0.2
CIRBP-239ENST00000592467 HMSDA8MTL9 139 aa13.81□□□□□ -0.2
CIRBP-239ENST00000592467 K7EQD1 137 aa13.81□□□□□ -0.2
CIRBP-239ENST00000592467 FHITP49789 147 aa13.81□□□□□ -0.2
CIRBP-239ENST00000592467 TTC32Q5I0X7 151 aa13.81□□□□□ -0.2
CIRBP-239ENST00000592467 C9orf85Q96MD7 179 aa13.81□□□□□ -0.2
CIRBP-239ENST00000592467 MAP1LC3BQ9GZQ8 125 aa13.81□□□□□ -0.2
CIRBP-239ENST00000592467 PEX7O00628 323 aa13.8□□□□□ -0.2
CIRBP-239ENST00000592467 RNASE3P12724 160 aaKnown RBP13.8□□□□□ -0.2
CIRBP-239ENST00000592467 MRPL23Q16540 153 aaKnown RBP13.8□□□□□ -0.2
CIRBP-239ENST00000592467 SAPCD1Q5SSQ6 148 aa13.8□□□□□ -0.2
CIRBP-239ENST00000592467 DPPA3Q6W0C5 159 aa13.8□□□□□ -0.2
CIRBP-239ENST00000592467 ARL2-SNX15V9GYD0 113 aa13.8□□□□□ -0.2
CIRBP-239ENST00000592467 DNAH5Q8TE73 4624 aa13.79□□□□□ -0.2
CIRBP-239ENST00000592467 IGKV3D-20A0A0C4DH25 116 aa13.79□□□□□ -0.2
CIRBP-239ENST00000592467 Q86TA4 180 aa13.79□□□□□ -0.2
CIRBP-239ENST00000592467 ZNF575Q86XF7 245 aa13.79□□□□□ -0.2
CIRBP-239ENST00000592467 OR4C5Q8NGB2 326 aa13.79□□□□□ -0.2
CIRBP-239ENST00000592467 NXPH4O95158 308 aa13.78□□□□□ -0.2
CIRBP-239ENST00000592467 IFNA7P01567 189 aa13.78□□□□□ -0.2
CIRBP-239ENST00000592467 GYPEP15421 78 aa13.78□□□□□ -0.2
CIRBP-239ENST00000592467 NEGR1Q7Z3B1 354 aa13.78□□□□□ -0.2
CIRBP-239ENST00000592467 COX8CQ7Z4L0 72 aa13.78□□□□□ -0.2
CIRBP-239ENST00000592467 HIST1H2BAQ96A08 127 aa13.78□□□□□ -0.2
CIRBP-239ENST00000592467 PTH2Q96A98 100 aa13.78□□□□□ -0.2
CIRBP-239ENST00000592467 NKX6-2Q9C056 277 aaPredicted RBP13.78□□□□□ -0.2
CIRBP-239ENST00000592467 LOC100131303A0A0U1RQF7 123 aa13.77□□□□□ -0.21
CIRBP-239ENST00000592467 PGPEP1LA6NFU8 196 aa13.77□□□□□ -0.21
CIRBP-239ENST00000592467 SIVA1O15304 175 aa13.77□□□□□ -0.21
CIRBP-239ENST00000592467 RS1O15537 224 aa13.77□□□□□ -0.21
CIRBP-239ENST00000592467 SEC11BP0C7V7 166 aa13.77□□□□□ -0.21
CIRBP-239ENST00000592467 GATA1P15976 413 aaPredicted RBP13.77□□□□□ -0.21
CIRBP-239ENST00000592467 CRIP1P50238 77 aa13.77□□□□□ -0.21
CIRBP-239ENST00000592467 ZFP69Q49AA0 526 aa13.77□□□□□ -0.21
CIRBP-239ENST00000592467 ORM1P02763 201 aa13.76□□□□□ -0.21
CIRBP-239ENST00000592467 MED14OSP0DP75 135 aa13.76□□□□□ -0.21
CIRBP-239ENST00000592467 BTF3P20290 206 aaKnown RBP13.76□□□□□ -0.21
CIRBP-239ENST00000592467 ZNF876PQ49A33 203 aa13.76□□□□□ -0.21
CIRBP-239ENST00000592467 CFAP126Q5VTH2 177 aa13.76□□□□□ -0.21
CIRBP-239ENST00000592467 Q6ZRN7 208 aaPredicted RBP13.76□□□□□ -0.21
CIRBP-239ENST00000592467 MBD3L1Q8WWY6 194 aa13.76□□□□□ -0.21
CIRBP-239ENST00000592467 HSPG2P98160 4391 aa13.76□□□□□ -0.21
CIRBP-239ENST00000592467 A0A0D9SG52 128 aa13.75□□□□□ -0.21
CIRBP-239ENST00000592467 C9JCJ5 164 aa13.75□□□□□ -0.21
CIRBP-239ENST00000592467 BCL2L11O43521 198 aa13.75□□□□□ -0.21
CIRBP-239ENST00000592467 ZNF506Q5JVG8 444 aa13.75□□□□□ -0.21
CIRBP-239ENST00000592467 ZC2HC1AQ96GY0 325 aa13.75□□□□□ -0.21
CIRBP-239ENST00000592467 FABP5P3A8MUU1 101 aa13.74□□□□□ -0.21
CIRBP-239ENST00000592467 SRIP30626 198 aa13.74□□□□□ -0.21
CIRBP-239ENST00000592467 PPT1P50897 306 aa13.74□□□□□ -0.21
CIRBP-239ENST00000592467 LINC00315P59091 139 aa13.74□□□□□ -0.21
CIRBP-239ENST00000592467 APOBP04114 4563 aaKnown RBP13.73□□□□□ -0.21
CIRBP-239ENST00000592467 TRBV6-1A0A0K0K1D8 114 aa13.73□□□□□ -0.21
CIRBP-239ENST00000592467 UMAD1C9J7I0 102 aa13.72□□□□□ -0.21
CIRBP-239ENST00000592467 WFDC10BQ8IUB3 73 aa13.72□□□□□ -0.21
CIRBP-239ENST00000592467 SLC25A29Q8N8R3 303 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms