RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 RANP62826 216 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-216ENST00000592445 ATP6V1FQ16864 119 aa12.94□□□□□ -0.34
PRKCSH-216ENST00000592445 SPANXN2Q5MJ10 180 aa12.94□□□□□ -0.34
PRKCSH-216ENST00000592445 TMEM252Q8N6L7 170 aa12.94□□□□□ -0.34
PRKCSH-216ENST00000592445 C11orf1Q9H5F2 150 aa12.94□□□□□ -0.34
PRKCSH-216ENST00000592445 RBFOX3A6NFN3 312 aa12.93□□□□□ -0.34
PRKCSH-216ENST00000592445 RHOHQ15669 191 aa12.93□□□□□ -0.34
PRKCSH-216ENST00000592445 CHAC1Q9BUX1 264 aa12.93□□□□□ -0.34
PRKCSH-216ENST00000592445 GTSF1LQ9H1H1 148 aa12.93□□□□□ -0.34
PRKCSH-216ENST00000592445 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
PRKCSH-216ENST00000592445 BAALCQ8WXS3 180 aa12.92□□□□□ -0.34
PRKCSH-216ENST00000592445 ATP5SQ99766 215 aa12.92□□□□□ -0.34
PRKCSH-216ENST00000592445 OR7C2O60412 319 aa12.91□□□□□ -0.34
PRKCSH-216ENST00000592445 BTCP35070 178 aa12.91□□□□□ -0.34
PRKCSH-216ENST00000592445 ASAH1Q13510 395 aa12.91□□□□□ -0.34
PRKCSH-216ENST00000592445 Q8N3U1 123 aa12.91□□□□□ -0.34
PRKCSH-216ENST00000592445 ATP6V0E2Q8NHE4 81 aa12.91□□□□□ -0.34
PRKCSH-216ENST00000592445 THAP6Q8TBB0 222 aa12.91□□□□□ -0.34
PRKCSH-216ENST00000592445 IGHV3-73A0A0B4J1V6 119 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 TRBV6-4A0A1B0GX49 114 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 DIRC3C9JPN6 131 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 TYMSP04818 313 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 TOR2AQ5JU69 321 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 CIRBP-AS1Q8TBR5 109 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 SDF2L1Q9HCN8 221 aa12.9□□□□□ -0.34
PRKCSH-216ENST00000592445 TRAV21A0A0B4J279 112 aa12.89□□□□□ -0.35
PRKCSH-216ENST00000592445 CNPY1Q3B7I2 92 aa12.89□□□□□ -0.35
PRKCSH-216ENST00000592445 ACOT6Q3I5F7 207 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-216ENST00000592445 ZNF876PQ49A33 203 aa12.89□□□□□ -0.35
PRKCSH-216ENST00000592445 HYLS1Q96M11 299 aa12.89□□□□□ -0.35
PRKCSH-216ENST00000592445 PKHD1L1Q86WI1 4243 aa12.89□□□□□ -0.35
PRKCSH-216ENST00000592445 RS1O15537 224 aa12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 UBE2L3P68036 154 aaKnown RBP12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 CFAP126Q5VTH2 177 aa12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 Q8N976 141 aa12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 COX11Q9Y6N1 276 aa12.88□□□□□ -0.35
PRKCSH-216ENST00000592445 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 CIDEAO60543 219 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 RAB32Q13637 225 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 ASB13Q8WXK3 278 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 KCNS1Q96KK3 526 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 SH3BGRL3Q9H299 93 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 KCNIP2Q9NS61 270 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 RPH3ALQ9UNE2 315 aa12.87□□□□□ -0.35
PRKCSH-216ENST00000592445 CCDC160A6NGH7 325 aa12.86□□□□□ -0.35
PRKCSH-216ENST00000592445 F6UZH7 168 aa12.85□□□□□ -0.35
PRKCSH-216ENST00000592445 IGLV2-8P01709 118 aa12.85□□□□□ -0.35
PRKCSH-216ENST00000592445 OR5C1Q8NGR4 320 aa12.85□□□□□ -0.35
PRKCSH-216ENST00000592445 CMTM2Q8TAZ6 248 aa12.85□□□□□ -0.35
PRKCSH-216ENST00000592445 RMI2Q96E14 147 aa12.85□□□□□ -0.35
PRKCSH-216ENST00000592445 NMES1Q9C002 83 aa12.85□□□□□ -0.35
PRKCSH-216ENST00000592445 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
PRKCSH-216ENST00000592445 NHLH2Q02577 135 aa12.84□□□□□ -0.35
PRKCSH-216ENST00000592445 DPPA3Q6W0C5 159 aa12.84□□□□□ -0.35
PRKCSH-216ENST00000592445 SEC22CQ9BRL7 303 aa12.84□□□□□ -0.35
PRKCSH-216ENST00000592445 TREM1Q9NP99 234 aa12.84□□□□□ -0.35
PRKCSH-216ENST00000592445 TRAV6A0A075B6T7 132 aa12.83□□□□□ -0.36
PRKCSH-216ENST00000592445 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
PRKCSH-216ENST00000592445 RPL37AP61513 92 aaKnown RBP12.83□□□□□ -0.36
PRKCSH-216ENST00000592445 RNF213Q63HN8 5207 aa12.83□□□□□ -0.36
PRKCSH-216ENST00000592445 IGKV2D-24A0A075B6R9 120 aa12.82□□□□□ -0.36
PRKCSH-216ENST00000592445 PGPA6NDG6 321 aa12.82□□□□□ -0.36
PRKCSH-216ENST00000592445 GOLT1AQ6ZVE7 132 aa12.82□□□□□ -0.36
PRKCSH-216ENST00000592445 SDHCQ99643 169 aaPredicted RBP12.82□□□□□ -0.36
PRKCSH-216ENST00000592445 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
PRKCSH-216ENST00000592445 URGCP-MRPS24S4R325 110 aa12.82□□□□□ -0.36
PRKCSH-216ENST00000592445 GAGE12JA6NER3 117 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 C17orf112F2Z3M2 114 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 GAGE1Q13065 139 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 GAGE4Q13068 117 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 GAGE5Q13069 117 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 IL15RAQ13261 267 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 KHDC3LQ587J8 217 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 FAM74A1Q5RGS3 127 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 TVP23CQ96ET8 276 aa12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 WDR61Q9GZS3 305 aaKnown RBP12.81□□□□□ -0.36
PRKCSH-216ENST00000592445 TRAV8-1A0A0A6YYK1 113 aa12.8□□□□□ -0.36
PRKCSH-216ENST00000592445 IL7P13232 177 aa12.8□□□□□ -0.36
PRKCSH-216ENST00000592445 TAS2R45P59539 299 aa12.8□□□□□ -0.36
PRKCSH-216ENST00000592445 A0A087WWC5 75 aa12.79□□□□□ -0.36
PRKCSH-216ENST00000592445 TCRBP04435 133 aa12.79□□□□□ -0.36
PRKCSH-216ENST00000592445 ZNF506Q5JVG8 444 aa12.79□□□□□ -0.36
PRKCSH-216ENST00000592445 MBD2Q9UBB5 411 aa12.79□□□□□ -0.36
PRKCSH-216ENST00000592445 PGPEP1LA6NFU8 196 aa12.78□□□□□ -0.36
PRKCSH-216ENST00000592445 IGLV2-11P01706 119 aa12.78□□□□□ -0.36
PRKCSH-216ENST00000592445 SEC11BP0C7V7 166 aa12.78□□□□□ -0.36
PRKCSH-216ENST00000592445 CYB561D1Q8N8Q1 229 aa12.78□□□□□ -0.36
PRKCSH-216ENST00000592445 DNAJC30Q96LL9 226 aa12.78□□□□□ -0.36
PRKCSH-216ENST00000592445 NUDT15Q9NV35 164 aa12.78□□□□□ -0.36
PRKCSH-216ENST00000592445 LYRM1O43325 122 aa12.77□□□□□ -0.37
PRKCSH-216ENST00000592445 HNRNPA3P51991 378 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-216ENST00000592445 FFAR4Q5NUL3 377 aa12.77□□□□□ -0.37
PRKCSH-216ENST00000592445 C9orf85Q96MD7 179 aa12.77□□□□□ -0.37
PRKCSH-216ENST00000592445 NDFIP1Q9BT67 221 aa12.77□□□□□ -0.37
PRKCSH-216ENST00000592445 TAAR5O14804 337 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms