RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 GYPEP15421 78 aa12.82□□□□□ -0.36
CCDC43-205ENST00000592333 HYLS1Q96M11 299 aa12.82□□□□□ -0.36
CCDC43-205ENST00000592333 MSRB1Q9NZV6 116 aa12.82□□□□□ -0.36
CCDC43-205ENST00000592333 IGHV3-16A0A0C4DH30 117 aa12.81□□□□□ -0.36
CCDC43-205ENST00000592333 SFTA3P0C7M3 94 aa12.81□□□□□ -0.36
CCDC43-205ENST00000592333 OR4C5Q8NGB2 326 aa12.81□□□□□ -0.36
CCDC43-205ENST00000592333 A6NHS1 94 aa12.8□□□□□ -0.36
CCDC43-205ENST00000592333 SMIM3Q9BZL3 60 aa12.8□□□□□ -0.36
CCDC43-205ENST00000592333 SDF2L1Q9HCN8 221 aa12.8□□□□□ -0.36
CCDC43-205ENST00000592333 TREM1Q9NP99 234 aa12.8□□□□□ -0.36
CCDC43-205ENST00000592333 A0A087WTM6 91 aa12.79□□□□□ -0.36
CCDC43-205ENST00000592333 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
CCDC43-205ENST00000592333 GNRH2O43555 120 aa12.78□□□□□ -0.36
CCDC43-205ENST00000592333 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
CCDC43-205ENST00000592333 OR10G9Q8NGN4 311 aa12.78□□□□□ -0.36
CCDC43-205ENST00000592333 OR10G7Q8NGN6 311 aa12.78□□□□□ -0.36
CCDC43-205ENST00000592333 NDFIP1Q9BT67 221 aa12.78□□□□□ -0.36
CCDC43-205ENST00000592333 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
CCDC43-205ENST00000592333 NAGKQ9UJ70 344 aa12.78□□□□□ -0.36
CCDC43-205ENST00000592333 FBLL1A6NHQ2 334 aaKnown RBP12.77□□□□□ -0.37
CCDC43-205ENST00000592333 K7EQM0 130 aa12.77□□□□□ -0.37
CCDC43-205ENST00000592333 TYMSP04818 313 aa12.77□□□□□ -0.37
CCDC43-205ENST00000592333 OR2G3Q8NGZ4 309 aa12.77□□□□□ -0.37
CCDC43-205ENST00000592333 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
CCDC43-205ENST00000592333 PTH2Q96A98 100 aa12.77□□□□□ -0.37
CCDC43-205ENST00000592333 TNFRSF18Q9Y5U5 241 aa12.77□□□□□ -0.37
CCDC43-205ENST00000592333 PFN1P07737 140 aaKnown RBP12.76□□□□□ -0.37
CCDC43-205ENST00000592333 STAG3L2P0CL84 134 aa12.76□□□□□ -0.37
CCDC43-205ENST00000592333 STAG3L3P0CL85 134 aa12.76□□□□□ -0.37
CCDC43-205ENST00000592333 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
CCDC43-205ENST00000592333 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
CCDC43-205ENST00000592333 ASB13Q8WXK3 278 aa12.76□□□□□ -0.37
CCDC43-205ENST00000592333 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
CCDC43-205ENST00000592333 PSMG3Q9BT73 122 aaPredicted RBP12.76□□□□□ -0.37
CCDC43-205ENST00000592333 EPM2AB3EWF7 344 aa12.75□□□□□ -0.37
CCDC43-205ENST00000592333 TAAR5O14804 337 aa12.75□□□□□ -0.37
CCDC43-205ENST00000592333 MBP02144 154 aa12.75□□□□□ -0.37
CCDC43-205ENST00000592333 CRYGDP07320 174 aa12.75□□□□□ -0.37
CCDC43-205ENST00000592333 RAB2AP61019 212 aa12.75□□□□□ -0.37
CCDC43-205ENST00000592333 SERF2P84101 59 aa12.75□□□□□ -0.37
CCDC43-205ENST00000592333 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
CCDC43-205ENST00000592333 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
CCDC43-205ENST00000592333 TRBV6-4A0A1B0GX49 114 aa12.74□□□□□ -0.37
CCDC43-205ENST00000592333 TCRAP04437 139 aa12.74□□□□□ -0.37
CCDC43-205ENST00000592333 CDC34P49427 236 aaPredicted RBP12.74□□□□□ -0.37
CCDC43-205ENST00000592333 LINC01556Q5JQF7 62 aa12.74□□□□□ -0.37
CCDC43-205ENST00000592333 TRAV8-1A0A0A6YYK1 113 aa12.73□□□□□ -0.37
CCDC43-205ENST00000592333 ARL14EPLP0DKL9 152 aa12.73□□□□□ -0.37
CCDC43-205ENST00000592333 ZNF876PQ49A33 203 aa12.73□□□□□ -0.37
CCDC43-205ENST00000592333 PRADC1Q9BSG0 188 aa12.73□□□□□ -0.37
CCDC43-205ENST00000592333 SH3BGRL3Q9H299 93 aa12.73□□□□□ -0.37
CCDC43-205ENST00000592333 TRAV8-6A0A0B4J262 113 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 F6UZH7 168 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 PPT1P50897 306 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 XGP55808 180 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 RHOHQ15669 191 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 NHLRC2Q8NBF2 726 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 AQP10Q96PS8 301 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 TMEM167BQ9NRX6 74 aa12.72□□□□□ -0.37
CCDC43-205ENST00000592333 RS1O15537 224 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 EIF3GO75821 320 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC43-205ENST00000592333 GNG5P63218 68 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 PIK3CD-AS1Q5SR53 167 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 SAPCD1Q5SSQ6 148 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 SLC25A29Q8N8R3 303 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.37
CCDC43-205ENST00000592333 RAB24Q969Q5 203 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 C9orf85Q96MD7 179 aa12.71□□□□□ -0.37
CCDC43-205ENST00000592333 IBA57-AS1B1ANH7 110 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 CXorf1O96002 111 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 MGST1P10620 155 aaKnown RBP12.7□□□□□ -0.38
CCDC43-205ENST00000592333 GCHFRP30047 84 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 SMUG1Q53HV7 270 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 CFAP126Q5VTH2 177 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 TMEM75Q8N9X5 138 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 TNFSF18Q9UNG2 199 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 PSG8Q9UQ74 426 aa12.7□□□□□ -0.38
CCDC43-205ENST00000592333 LOC100131303A0A0U1RQF7 123 aa12.69□□□□□ -0.38
CCDC43-205ENST00000592333 HMGB3O15347 200 aaKnown RBP12.69□□□□□ -0.38
CCDC43-205ENST00000592333 GCSHP23434 173 aa12.69□□□□□ -0.38
CCDC43-205ENST00000592333 FLI1Q01543 452 aaPredicted RBP12.69□□□□□ -0.38
CCDC43-205ENST00000592333 CYB561D1Q8N8Q1 229 aa12.69□□□□□ -0.38
CCDC43-205ENST00000592333 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
CCDC43-205ENST00000592333 PSCAO43653 123 aa12.68□□□□□ -0.38
CCDC43-205ENST00000592333 GCGP01275 180 aa12.68□□□□□ -0.38
CCDC43-205ENST00000592333 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
CCDC43-205ENST00000592333 KRTAP10-1P60331 282 aa12.68□□□□□ -0.38
CCDC43-205ENST00000592333 SUMO1P63165 101 aaKnown RBP12.68□□□□□ -0.38
CCDC43-205ENST00000592333 LELP1Q5T871 98 aa12.68□□□□□ -0.38
CCDC43-205ENST00000592333 HSD17B11Q8NBQ5 300 aa12.68□□□□□ -0.38
CCDC43-205ENST00000592333 FRZBQ92765 325 aa12.68□□□□□ -0.38
CCDC43-205ENST00000592333 A0A1W2PRE2 83 aa12.67□□□□□ -0.38
CCDC43-205ENST00000592333 ATP6V0CP27449 155 aa12.67□□□□□ -0.38
CCDC43-205ENST00000592333 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-205ENST00000592333 LAGE3Q14657 143 aa12.67□□□□□ -0.38
CCDC43-205ENST00000592333 ZFP2Q6ZN57 461 aa12.67□□□□□ -0.38
CCDC43-205ENST00000592333 ACTR3CQ9C0K3 210 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-205ENST00000592333 GTSF1LQ9H1H1 148 aa12.67□□□□□ -0.38
CCDC43-205ENST00000592333 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms