RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 KCNS1Q96KK3 526 aa8.61□□□□□ -1.03
TPM4-213ENST00000591226 C20orf173Q96LM9 149 aa8.61□□□□□ -1.03
TPM4-213ENST00000591226 PSMG3-AS1Q96PY0 264 aa8.61□□□□□ -1.03
TPM4-213ENST00000591226 AGPAT4-IT1Q9H0P7 198 aa8.61□□□□□ -1.03
TPM4-213ENST00000591226 J3QL48 77 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 DUX5Q96PT3 197 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 SONP18583 2426 aaKnown RBP8.6□□□□□ -1.03
TPM4-213ENST00000591226 MYO9AB2RTY4 2548 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 A0A1W2PS18 150 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 EDN2P20800 178 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 RHPN1-AS1Q9BWJ2 59 aa8.6□□□□□ -1.03
TPM4-213ENST00000591226 PDZD2O15018 2839 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 PMCHP20382 165 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 RIGQ13278 110 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 KLF5Q13887 457 aaPredicted RBP8.59□□□□□ -1.03
TPM4-213ENST00000591226 TMEM78Q5T7P6 136 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 Q6AWC8 147 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 DAZ1Q9NQZ3 744 aaKnown RBP8.59□□□□□ -1.03
TPM4-213ENST00000591226 ITPR2Q14571 2701 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 TRAV8-6A0A0B4J262 113 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 TMEM89A2RUT3 159 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 SOCS3O14543 225 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 ZNF138P52744 262 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 RPL11P62913 178 aaKnown RBP8.59□□□□□ -1.03
TPM4-213ENST00000591226 NRN1Q9NPD7 142 aa8.59□□□□□ -1.03
TPM4-213ENST00000591226 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 GPX1P07203 203 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 MUC21A0A0G2JKD1 596 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 MUC21A0A140T8X8 626 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 FABP5P3A8MUU1 101 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 ORM1P02763 201 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 AMTP48728 403 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 FAM106AQ4KMX7 169 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 MUC21Q5SSG8 566 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 C9orf47Q6ZRZ4 202 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 BORCS7Q96B45 105 aa8.58□□□□□ -1.04
TPM4-213ENST00000591226 ZNF324O75467 553 aaPredicted RBP8.57□□□□□ -1.04
TPM4-213ENST00000591226 DEFB1P60022 68 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 FAM19A2Q8N3H0 131 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 CKS1BP61024 79 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 FOXE3Q13461 319 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 A0A1B0GW15 77 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 TMEM213A2RRL7 107 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 FAM181BA6NEQ2 426 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 K7EMT4 169 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 C3orf79P0CE67 100 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 TNP2Q05952 138 aa8.57□□□□□ -1.04
TPM4-213ENST00000591226 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
TPM4-213ENST00000591226 NUDT3O95989 172 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 SRD5A1P18405 259 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 NTF3P20783 257 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 MYOZ3Q8TDC0 251 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 ZNF479Q96JC4 524 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 ELANEP08246 267 aa8.56□□□□□ -1.04
TPM4-213ENST00000591226 LGALS1P09382 135 aaKnown RBP8.55□□□□□ -1.04
TPM4-213ENST00000591226 Q6ZQT7 251 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 DEFB125Q8N687 156 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 UFC1Q9Y3C8 167 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 GCN1Q92616 2671 aaKnown RBP8.55□□□□□ -1.04
TPM4-213ENST00000591226 GAGE10A6NGK3 116 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 HSBP1O75506 76 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 IGLL1P15814 213 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 HIST1H1AQ02539 215 aaPredicted RBP8.55□□□□□ -1.04
TPM4-213ENST00000591226 PRR9Q5T870 116 aa8.55□□□□□ -1.04
TPM4-213ENST00000591226 ACANP16112 2415 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 A0A087WW49 117 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 IGKV3D-20A0A0C4DH25 116 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 F6UB75 175 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 OVOL1O14753 267 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 BVES-AS1Q5T3Y7 98 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 ZNF493Q6ZR52 646 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 OR10J6PQ8NGY7 276 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 Q8N2B8 174 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 SIGMAR1Q99720 223 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 AKAP9Q99996 3911 aa8.54□□□□□ -1.04
TPM4-213ENST00000591226 SYNJ2BPP57105 145 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 TWIST1Q15672 202 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 UBE2E2Q96LR5 201 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 M0R2Z0 102 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 C18orf65Q6ZTR6 163 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 WFDC3Q8IUB2 231 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 AMN1Q8IY45 258 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 LINC00477Q96M19 166 aa8.53□□□□□ -1.04
TPM4-213ENST00000591226 PMCHL1Q16048 86 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 FAM104BQ5XKR9 115 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 ZFAND2AQ8N6M9 145 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 OR8A1Q8NGG7 326 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 MSRB1Q9NZV6 116 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 LENEPQ9Y5L5 61 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms