RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 MED9Q9NWA0 146 aa15.29■□□□□ 0.04
R3HDM4-206ENST00000590454 DKK2Q9UBU2 259 aa15.29■□□□□ 0.04
R3HDM4-206ENST00000590454 ZFP30Q9Y2G7 519 aa15.29■□□□□ 0.04
R3HDM4-206ENST00000590454 TAGLN2P37802 199 aaKnown RBP15.28■□□□□ 0.04
R3HDM4-206ENST00000590454 C12orf74Q32Q52 190 aa15.28■□□□□ 0.04
R3HDM4-206ENST00000590454 ANXA2RQ3ZCQ2 193 aa15.28■□□□□ 0.04
R3HDM4-206ENST00000590454 COX8CQ7Z4L0 72 aa15.28■□□□□ 0.04
R3HDM4-206ENST00000590454 FAM210AQ96ND0 272 aa15.28■□□□□ 0.04
R3HDM4-206ENST00000590454 GSN-AS1Q9NRJ2 163 aa15.28■□□□□ 0.04
R3HDM4-206ENST00000590454 S100A9P06702 114 aaKnown RBP15.27■□□□□ 0.04
R3HDM4-206ENST00000590454 PFN1P07737 140 aaKnown RBP15.27■□□□□ 0.04
R3HDM4-206ENST00000590454 ZNF493Q6ZR52 646 aa15.27■□□□□ 0.04
R3HDM4-206ENST00000590454 BAGE2Q86Y30 109 aa15.27■□□□□ 0.04
R3HDM4-206ENST00000590454 TMEM183AQ8IXX5 376 aa15.27■□□□□ 0.04
R3HDM4-206ENST00000590454 MLST8Q9BVC4 326 aa15.27■□□□□ 0.04
R3HDM4-206ENST00000590454 GNRH2O43555 120 aa15.26■□□□□ 0.03
R3HDM4-206ENST00000590454 SPART-AS1P0CW21 52 aa15.26■□□□□ 0.03
R3HDM4-206ENST00000590454 FAM159AQ6UWV7 190 aa15.26■□□□□ 0.03
R3HDM4-206ENST00000590454 EIF5A2Q9GZV4 153 aaKnown RBP15.26■□□□□ 0.03
R3HDM4-206ENST00000590454 NOP10Q9NPE3 64 aaKnown RBP15.26■□□□□ 0.03
R3HDM4-206ENST00000590454 MDFICQ9P1T7 246 aa15.26■□□□□ 0.03
R3HDM4-206ENST00000590454 TRBV20OR9-2A0A075B6H5 130 aa15.25■□□□□ 0.03
R3HDM4-206ENST00000590454 TDRG1Q3Y452 100 aa15.25■□□□□ 0.03
R3HDM4-206ENST00000590454 CENPWQ5EE01 88 aa15.25■□□□□ 0.03
R3HDM4-206ENST00000590454 DNAH10Q8IVF4 4471 aa15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 PGPEP1LA6NFU8 196 aa15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 SH2D1AO60880 128 aa15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 IGLV2-8P01709 118 aa15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 SRSF3P84103 164 aaKnown RBP15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 Q6ZTC4 211 aa15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 PHLDA1Q8WV24 401 aaPredicted RBP15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 TIMM8BQ9Y5J9 83 aaPredicted RBP15.24■□□□□ 0.03
R3HDM4-206ENST00000590454 C9JQL5 133 aa15.23■□□□□ 0.03
R3HDM4-206ENST00000590454 TYMSP04818 313 aa15.23■□□□□ 0.03
R3HDM4-206ENST00000590454 ZNF674Q2M3X9 581 aa15.23■□□□□ 0.03
R3HDM4-206ENST00000590454 IGKV3D-20A0A0C4DH25 116 aa15.22■□□□□ 0.03
R3HDM4-206ENST00000590454 FABP5P3A8MUU1 101 aa15.22■□□□□ 0.03
R3HDM4-206ENST00000590454 SRP19P09132 144 aaKnown RBP15.22■□□□□ 0.03
R3HDM4-206ENST00000590454 TCL1AP56279 114 aa15.22■□□□□ 0.03
R3HDM4-206ENST00000590454 IGHV3-16A0A0C4DH30 117 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 LYRM9A8MSI8 78 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 SNURFLB1AK76 121 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 TMEM250H0YL14 139 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 DEFB130BP0DP73 79 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 DEFB130AP0DP74 79 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 CEBPGP53567 150 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 IBA57Q5T440 356 aaKnown RBP15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 FAM162BQ5T6X4 162 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 ZNF575Q86XF7 245 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 PARLQ9H300 379 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 SDF2L1Q9HCN8 221 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 KIAA1109Q2LD37 5005 aa15.21■□□□□ 0.03
R3HDM4-206ENST00000590454 M0R036 132 aa15.2■□□□□ 0.02
R3HDM4-206ENST00000590454 GNG4P50150 75 aa15.2■□□□□ 0.02
R3HDM4-206ENST00000590454 DAZ2Q13117 558 aaKnown RBP15.2■□□□□ 0.02
R3HDM4-206ENST00000590454 PRR27Q6MZM9 219 aa15.2■□□□□ 0.02
R3HDM4-206ENST00000590454 Q6ZTI0 123 aa15.2■□□□□ 0.02
R3HDM4-206ENST00000590454 TRGV11A0A075B6L2 103 aa15.19■□□□□ 0.02
R3HDM4-206ENST00000590454 ORM1P02763 201 aa15.19■□□□□ 0.02
R3HDM4-206ENST00000590454 DAD1P61803 113 aa15.19■□□□□ 0.02
R3HDM4-206ENST00000590454 ZNF415Q09FC8 603 aa15.19■□□□□ 0.02
R3HDM4-206ENST00000590454 GAGE12BA1L429 117 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 KRBOX1C9JBD0 128 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 GAGE7O76087 117 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 GAGE12FP0CL80 117 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 GAGE12GP0CL81 117 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 GAGE12IP0CL82 117 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 MGST1P10620 155 aaKnown RBP15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 RAB14P61106 215 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 LINC00612Q8N6U2 182 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 KCNS1Q96KK3 526 aa15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 MRPL16Q9NX20 251 aaKnown RBP15.18■□□□□ 0.02
R3HDM4-206ENST00000590454 TMSB15BA0A087X1C1 80 aa15.17■□□□□ 0.02
R3HDM4-206ENST00000590454 TEX48A0A1B0GUV7 120 aa15.17■□□□□ 0.02
R3HDM4-206ENST00000590454 SPINK4O60575 86 aa15.17■□□□□ 0.02
R3HDM4-206ENST00000590454 CLLU1Q5K131 121 aa15.17■□□□□ 0.02
R3HDM4-206ENST00000590454 HECTD4Q9Y4D8 3996 aa15.17■□□□□ 0.02
R3HDM4-206ENST00000590454 TRGV1A0A0A0MS02 117 aa15.16■□□□□ 0.02
R3HDM4-206ENST00000590454 GRIFINA4D1Z8 144 aa15.16■□□□□ 0.02
R3HDM4-206ENST00000590454 B4DEV8 164 aa15.16■□□□□ 0.02
R3HDM4-206ENST00000590454 RPL19P84098 196 aaKnown RBP15.16■□□□□ 0.02
R3HDM4-206ENST00000590454 OR5I1Q13606 314 aa15.16■□□□□ 0.02
R3HDM4-206ENST00000590454 K7EN84 100 aa15.15■□□□□ 0.02
R3HDM4-206ENST00000590454 NDUFS6O75380 124 aaKnown RBP15.15■□□□□ 0.02
R3HDM4-206ENST00000590454 RNASE3P12724 160 aaKnown RBP15.15■□□□□ 0.02
R3HDM4-206ENST00000590454 HTN3P15516 51 aa15.15■□□□□ 0.02
R3HDM4-206ENST00000590454 LINC01559Q495D7 138 aa15.15■□□□□ 0.02
R3HDM4-206ENST00000590454 OCC1Q8TAD7 63 aa15.15■□□□□ 0.02
R3HDM4-206ENST00000590454 TRAV10A0A0B4J240 114 aa15.14■□□□□ 0.01
R3HDM4-206ENST00000590454 C9JCJ5 164 aa15.14■□□□□ 0.01
R3HDM4-206ENST00000590454 PEA15Q15121 130 aa15.14■□□□□ 0.01
R3HDM4-206ENST00000590454 MUC4Q99102 2169 aa15.14■□□□□ 0.01
R3HDM4-206ENST00000590454 DEFB131BA0A096LNP1 70 aa15.13■□□□□ 0.01
R3HDM4-206ENST00000590454 SMIM12Q96EX1 92 aa15.13■□□□□ 0.01
R3HDM4-206ENST00000590454 C9orf85Q96MD7 179 aa15.13■□□□□ 0.01
R3HDM4-206ENST00000590454 C19orf71A6NCJ1 209 aa15.12■□□□□ 0.01
R3HDM4-206ENST00000590454 TCTAP57738 103 aa15.12■□□□□ 0.01
R3HDM4-206ENST00000590454 SMIM7Q9BQ49 75 aa15.12■□□□□ 0.01
R3HDM4-206ENST00000590454 SPXQ9BT56 116 aa15.12■□□□□ 0.01
R3HDM4-206ENST00000590454 RYR1P21817 5038 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms