RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-215	ENST00000589883	FAM210A	Q96ND0	272 aa		13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883	TP53TG3	Q9ULZ0	132 aa		13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883	VPS13D	Q5THJ4	4388 aa		13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883		Q6ZTC4	211 aa		13.81	□□□□□ -0.2
PTBP1-215	ENST00000589883	LINC00467	Q9BRT7	94 aa		13.81	□□□□□ -0.2
PTBP1-215	ENST00000589883	IGHV4-4	A0A075B6R2	117 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	PLAC8L1	A1L4L8	177 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	RAB19	A4D1S5	217 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	PFN1	P07737	140 aa	Known RBP	13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	RAB14	P61106	215 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	FAM222A	Q5U5X8	452 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	FAM159A	Q6UWV7	190 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	ZNF493	Q6ZR52	646 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	ZNF767P	Q75MW2	155 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	TMEM183A	Q8IXX5	376 aa		13.8	□□□□□ -0.2
PTBP1-215	ENST00000589883	CEBPG	P53567	150 aa		13.79	□□□□□ -0.2
PTBP1-215	ENST00000589883	ANXA2R	Q3ZCQ2	193 aa		13.79	□□□□□ -0.2
PTBP1-215	ENST00000589883	CENPW	Q5EE01	88 aa		13.79	□□□□□ -0.2
PTBP1-215	ENST00000589883	LINC00336	Q6ZUF6	198 aa		13.79	□□□□□ -0.2
PTBP1-215	ENST00000589883	GSN-AS1	Q9NRJ2	163 aa		13.79	□□□□□ -0.2
PTBP1-215	ENST00000589883	C11orf21	Q9P2W6	132 aa		13.79	□□□□□ -0.2
PTBP1-215	ENST00000589883	DKK2	Q9UBU2	259 aa		13.79	□□□□□ -0.2
PTBP1-215	ENST00000589883	SPART-AS1	P0CW21	52 aa		13.78	□□□□□ -0.2
PTBP1-215	ENST00000589883	CRIP1	P50238	77 aa		13.78	□□□□□ -0.2
PTBP1-215	ENST00000589883	NOP10	Q9NPE3	64 aa	Known RBP	13.78	□□□□□ -0.2
PTBP1-215	ENST00000589883	DNAH6	Q9C0G6	4158 aa		13.78	□□□□□ -0.2
PTBP1-215	ENST00000589883	DEFB131B	A0A096LNP1	70 aa		13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	FABP5P3	A8MUU1	101 aa		13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	SNURFL	B1AK76	121 aa		13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	SH2D1A	O60880	128 aa		13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	ZNF674	Q2M3X9	581 aa		13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	COX8C	Q7Z4L0	72 aa		13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	C11orf72	Q8NBR9	251 aa		13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.77	□□□□□ -0.21
PTBP1-215	ENST00000589883	TMEM250	H0YL14	139 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	GNRH2	O43555	120 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883		P0DMU3	169 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	FAM231A	P0DMU4	169 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	FAM231C	P0DMU5	169 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	GNG4	P50150	75 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	C12orf74	Q32Q52	190 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	FAM162B	Q5T6X4	162 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	NDUFAF3	Q9BU61	184 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	MLST8	Q9BVC4	326 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	KRTAP17-1	Q9BYP8	105 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	SDF2L1	Q9HCN8	221 aa		13.76	□□□□□ -0.21
PTBP1-215	ENST00000589883	TRGV11	A0A075B6L2	103 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	PGPEP1L	A6NFU8	196 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	TYMS	P04818	313 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	ZNF415	Q09FC8	603 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	TDRG1	Q3Y452	100 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	PRR27	Q6MZM9	219 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	PARL	Q9H300	379 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	MDFIC	Q9P1T7	246 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	HERC2	O95714	4834 aa		13.75	□□□□□ -0.21
PTBP1-215	ENST00000589883	HECTD4	Q9Y4D8	3996 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	TRBV20OR9-2	A0A075B6H5	130 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	TEX48	A0A1B0GUV7	120 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	LYRM9	A8MSI8	78 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883		M0R036	132 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	ORM1	P02763	201 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	SRP19	P09132	144 aa	Known RBP	13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	DEFB130B	P0DP73	79 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	DEFB130A	P0DP74	79 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	MGST1	P10620	155 aa	Known RBP	13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	TCL1A	P56279	114 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	SRSF3	P84103	164 aa	Known RBP	13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	IBA57	Q5T440	356 aa	Known RBP	13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	KCNS1	Q96KK3	526 aa		13.74	□□□□□ -0.21
PTBP1-215	ENST00000589883	IGKV3D-20	A0A0C4DH25	116 aa		13.73	□□□□□ -0.21
PTBP1-215	ENST00000589883	IGLV2-8	P01709	118 aa		13.73	□□□□□ -0.21
PTBP1-215	ENST00000589883	DAD1	P61803	113 aa		13.73	□□□□□ -0.21
PTBP1-215	ENST00000589883	CLLU1	Q5K131	121 aa		13.73	□□□□□ -0.21
PTBP1-215	ENST00000589883	IGHV3-16	A0A0C4DH30	117 aa		13.72	□□□□□ -0.21
PTBP1-215	ENST00000589883		C9JQL5	133 aa		13.72	□□□□□ -0.21
PTBP1-215	ENST00000589883	PEA15	Q15121	130 aa		13.72	□□□□□ -0.21
PTBP1-215	ENST00000589883	POM121L12	Q8N7R1	296 aa		13.72	□□□□□ -0.21
PTBP1-215	ENST00000589883	TMSB15B	A0A087X1C1	80 aa		13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883	GAGE12B	A1L429	117 aa		13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883		B4DEV8	164 aa		13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883	GAGE7	O76087	117 aa		13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883	GAGE12F	P0CL80	117 aa		13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883	GAGE12G	P0CL81	117 aa		13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883	GAGE12I	P0CL82	117 aa		13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883	DAZ2	Q13117	558 aa	Known RBP	13.71	□□□□□ -0.21
PTBP1-215	ENST00000589883	TRGV1	A0A0A0MS02	117 aa		13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883		C9JCJ5	164 aa		13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883	NDUFS6	O75380	124 aa	Known RBP	13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883		Q6ZTI0	123 aa		13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883	SMIM12	Q96EX1	92 aa		13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883	FAM210B	Q96KR6	192 aa		13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883	SMIM7	Q9BQ49	75 aa		13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883	MRPL16	Q9NX20	251 aa	Known RBP	13.7	□□□□□ -0.22
PTBP1-215	ENST00000589883	KRBOX1	C9JBD0	128 aa		13.69	□□□□□ -0.22
PTBP1-215	ENST00000589883	HTN3	P15516	51 aa		13.69	□□□□□ -0.22
PTBP1-215	ENST00000589883	RPL19	P84098	196 aa	Known RBP	13.69	□□□□□ -0.22
PTBP1-215	ENST00000589883	OR5I1	Q13606	314 aa		13.69	□□□□□ -0.22
PTBP1-215	ENST00000589883	GRIFIN	A4D1Z8	144 aa		13.68	□□□□□ -0.22
PTBP1-215	ENST00000589883	ZNF727	A8MUV8	499 aa		13.68	□□□□□ -0.22
PTBP1-215	ENST00000589883	LINC01559	Q495D7	138 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms