RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ACTR3CQ9C0K3 210 aaPredicted RBP8.41□□□□□ -1.06
VAT1-206ENST00000589709 PRO0255Q9UI72 69 aa8.41□□□□□ -1.06
VAT1-206ENST00000589709 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
VAT1-206ENST00000589709 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
VAT1-206ENST00000589709 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
VAT1-206ENST00000589709 PAX4O43316 350 aa8.4□□□□□ -1.06
VAT1-206ENST00000589709 OR7C2O60412 319 aa8.4□□□□□ -1.06
VAT1-206ENST00000589709 ATP6V1G1O75348 118 aa8.4□□□□□ -1.06
VAT1-206ENST00000589709 TAGLN2P37802 199 aaKnown RBP8.4□□□□□ -1.06
VAT1-206ENST00000589709 Q6ZQT7 251 aa8.4□□□□□ -1.06
VAT1-206ENST00000589709 MBD3L1Q8WWY6 194 aa8.4□□□□□ -1.06
VAT1-206ENST00000589709 PPT1P50897 306 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 TAS2R45P59539 299 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 UBE2L3P68036 154 aaKnown RBP8.39□□□□□ -1.07
VAT1-206ENST00000589709 ZNF415Q09FC8 603 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 FHL2Q14192 279 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 KHDC3LQ587J8 217 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 SPATA12Q7Z6I5 190 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 OR10G4Q8NGN3 311 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 OR10G9Q8NGN4 311 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 OR10G7Q8NGN6 311 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 Q8TAT8 98 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 SMDT1Q9H4I9 107 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 MRPL16Q9NX20 251 aaKnown RBP8.39□□□□□ -1.07
VAT1-206ENST00000589709 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
VAT1-206ENST00000589709 A0A1W2PPV4 95 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 DIRC3C9JPN6 131 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 SIVA1O15304 175 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 IFNA1P01562 189 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 CDC34P49427 236 aaPredicted RBP8.38□□□□□ -1.07
VAT1-206ENST00000589709 CRYBA4P53673 196 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
VAT1-206ENST00000589709 Q6AWC8 147 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 SLC7A5P1Q8MH63 180 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 ARL6IP6Q8N6S5 226 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 RASL10AQ92737 203 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 SPXQ9BT56 116 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 DNAH5Q8TE73 4624 aa8.38□□□□□ -1.07
VAT1-206ENST00000589709 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 NDUFS6O75380 124 aaKnown RBP8.37□□□□□ -1.07
VAT1-206ENST00000589709 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 TDRG1Q3Y452 100 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 SFT2D1Q8WV19 159 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 PCNPQ8WW12 178 aaKnown RBP8.37□□□□□ -1.07
VAT1-206ENST00000589709 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 OTORQ9NRC9 128 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 MDFICQ9P1T7 246 aa8.37□□□□□ -1.07
VAT1-206ENST00000589709 TRGV11A0A075B6L2 103 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 KRBOX1C9JBD0 128 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 NXPH4O95158 308 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 LINC00315P59091 139 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 PEA15Q15121 130 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 MUC21Q5SSG8 566 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 LYPD5Q6UWN5 251 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 FAM159AQ6UWV7 190 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 PQLC2Q6ZP29 291 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 Q6ZRN7 208 aaPredicted RBP8.36□□□□□ -1.07
VAT1-206ENST00000589709 NEGR1Q7Z3B1 354 aa8.36□□□□□ -1.07
VAT1-206ENST00000589709 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 PGPA6NDG6 321 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 FHITP49789 147 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 TMEM183BQ1AE95 376 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 CMTM2Q8TAZ6 248 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 RAB24Q969Q5 203 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 FAM210AQ96ND0 272 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 TXNDC17Q9BRA2 123 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 MANBALQ9NQG1 85 aa8.35□□□□□ -1.07
VAT1-206ENST00000589709 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
VAT1-206ENST00000589709 K7EP13 123 aa8.34□□□□□ -1.07
VAT1-206ENST00000589709 CXorf1O96002 111 aa8.34□□□□□ -1.07
VAT1-206ENST00000589709 MAPKAPK5-AS1Q8N8E1 139 aa8.34□□□□□ -1.07
VAT1-206ENST00000589709 SUN5Q8TC36 379 aa8.34□□□□□ -1.07
VAT1-206ENST00000589709 ZNF479Q96JC4 524 aa8.34□□□□□ -1.07
VAT1-206ENST00000589709 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
VAT1-206ENST00000589709 TRAV9-2A0A087WT02 112 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 K7EQD1 137 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 ORM1P02763 201 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 STAG3L2P0CL84 134 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 STAG3L3P0CL85 134 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 ZNF726P1Q15940 193 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 NFE4Q86UQ8 179 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 Q8N1X5 172 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 EIF5A2Q9GZV4 153 aaKnown RBP8.33□□□□□ -1.08
VAT1-206ENST00000589709 TMEM167BQ9NRX6 74 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
VAT1-206ENST00000589709 TRAV4A0A0B4J268 109 aa8.32□□□□□ -1.08
VAT1-206ENST00000589709 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
VAT1-206ENST00000589709 IGHV3-16A0A0C4DH30 117 aa8.32□□□□□ -1.08
VAT1-206ENST00000589709 RBFOX3A6NFN3 312 aa8.32□□□□□ -1.08
VAT1-206ENST00000589709 M0R2P5 195 aa8.32□□□□□ -1.08
VAT1-206ENST00000589709 EIF3GO75821 320 aaKnown RBP eCLIP8.32□□□□□ -1.08
VAT1-206ENST00000589709 SFTA3P0C7M3 94 aa8.32□□□□□ -1.08
VAT1-206ENST00000589709 SRIP30626 198 aa8.32□□□□□ -1.08
VAT1-206ENST00000589709 ZNF506Q5JVG8 444 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms