RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 S100A10P60903 97 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
CXXC1-211ENST00000589548 HBG1P69891 147 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 HBG2P69892 147 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 DPPA3Q6W0C5 159 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 STX12Q86Y82 276 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 THAP6Q8TBB0 222 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 CIRBP-AS1Q8TBR5 109 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
CXXC1-211ENST00000589548 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 PVALBP20472 110 aaPredicted RBP11.74□□□□□ -0.53
CXXC1-211ENST00000589548 IL15RAQ13261 267 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 RAB32Q13637 225 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 RHOHQ15669 191 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 ATP6V1FQ16864 119 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 BAALCQ8WXS3 180 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 C2orf50Q96LR7 162 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 GTSF1LQ9H1H1 148 aa11.74□□□□□ -0.53
CXXC1-211ENST00000589548 TRBV6-4A0A1B0GX49 114 aa11.73□□□□□ -0.53
CXXC1-211ENST00000589548 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
CXXC1-211ENST00000589548 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
CXXC1-211ENST00000589548 SEC22CQ9BRL7 303 aa11.73□□□□□ -0.53
CXXC1-211ENST00000589548 PRADC1Q9BSG0 188 aa11.73□□□□□ -0.53
CXXC1-211ENST00000589548 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
CXXC1-211ENST00000589548 IGHV3-73A0A0B4J1V6 119 aa11.72□□□□□ -0.53
CXXC1-211ENST00000589548 F6UZH7 168 aa11.72□□□□□ -0.53
CXXC1-211ENST00000589548 RS1O15537 224 aa11.72□□□□□ -0.53
CXXC1-211ENST00000589548 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
CXXC1-211ENST00000589548 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
CXXC1-211ENST00000589548 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
CXXC1-211ENST00000589548 RNF213Q63HN8 5207 aa11.71□□□□□ -0.53
CXXC1-211ENST00000589548 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
CXXC1-211ENST00000589548 OR7C2O60412 319 aa11.71□□□□□ -0.53
CXXC1-211ENST00000589548 HNRNPA3P51991 378 aaKnown RBP11.71□□□□□ -0.53
CXXC1-211ENST00000589548 NHLH2Q02577 135 aa11.71□□□□□ -0.53
CXXC1-211ENST00000589548 UBE2L3P68036 154 aaKnown RBP11.7□□□□□ -0.54
CXXC1-211ENST00000589548 ASAH1Q13510 395 aa11.7□□□□□ -0.54
CXXC1-211ENST00000589548 DNAJC30Q96LL9 226 aa11.7□□□□□ -0.54
CXXC1-211ENST00000589548 SDF2L1Q9HCN8 221 aa11.7□□□□□ -0.54
CXXC1-211ENST00000589548 TRAV21A0A0B4J279 112 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 RBFOX3A6NFN3 312 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 CENPXA8MT69 81 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 IGLV2-8P01709 118 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 ZNF876PQ49A33 203 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 HYLS1Q96M11 299 aa11.69□□□□□ -0.54
CXXC1-211ENST00000589548 TRAV6A0A075B6T7 132 aa11.68□□□□□ -0.54
CXXC1-211ENST00000589548 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
CXXC1-211ENST00000589548 IL7P13232 177 aa11.68□□□□□ -0.54
CXXC1-211ENST00000589548 CNPY1Q3B7I2 92 aa11.68□□□□□ -0.54
CXXC1-211ENST00000589548 RPH3ALQ9UNE2 315 aa11.68□□□□□ -0.54
CXXC1-211ENST00000589548 TRAV8-1A0A0A6YYK1 113 aa11.67□□□□□ -0.54
CXXC1-211ENST00000589548 PLA2G10O15496 165 aa11.67□□□□□ -0.54
CXXC1-211ENST00000589548 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
CXXC1-211ENST00000589548 ASB13Q8WXK3 278 aa11.67□□□□□ -0.54
CXXC1-211ENST00000589548 DAZAP1Q96EP5 407 aaKnown RBP11.67□□□□□ -0.54
CXXC1-211ENST00000589548 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
CXXC1-211ENST00000589548 C11orf21Q9P2W6 132 aa11.67□□□□□ -0.54
CXXC1-211ENST00000589548 CIDEAO60543 219 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 MT1HL1P0DM35 61 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 ZNF506Q5JVG8 444 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 GOLT1AQ6ZVE7 132 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 Q8N976 141 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 ATP5SQ99766 215 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 TREM1Q9NP99 234 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 Q9UF83 564 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 LRP2P98164 4655 aa11.66□□□□□ -0.54
CXXC1-211ENST00000589548 PGPEP1LA6NFU8 196 aa11.65□□□□□ -0.54
CXXC1-211ENST00000589548 CCDC160A6NGH7 325 aa11.65□□□□□ -0.54
CXXC1-211ENST00000589548 GGTLC3B5MD39 225 aa11.65□□□□□ -0.54
CXXC1-211ENST00000589548 TCRBP04435 133 aa11.65□□□□□ -0.54
CXXC1-211ENST00000589548 MGST1P10620 155 aaKnown RBP11.65□□□□□ -0.54
CXXC1-211ENST00000589548 TOR2AQ5JU69 321 aa11.65□□□□□ -0.54
CXXC1-211ENST00000589548 OTORQ9NRC9 128 aa11.65□□□□□ -0.54
CXXC1-211ENST00000589548 PGPA6NDG6 321 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 GAGE12JA6NER3 117 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
CXXC1-211ENST00000589548 RPL37AP61513 92 aaKnown RBP11.64□□□□□ -0.55
CXXC1-211ENST00000589548 GAGE1Q13065 139 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 GAGE4Q13068 117 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 GAGE5Q13069 117 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 ACOT6Q3I5F7 207 aaPredicted RBP11.64□□□□□ -0.55
CXXC1-211ENST00000589548 GAGE13Q4V321 117 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 RBM38Q9H0Z9 239 aaKnown RBP11.64□□□□□ -0.55
CXXC1-211ENST00000589548 KCNIP2Q9NS61 270 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 NUDT15Q9NV35 164 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 COX11Q9Y6N1 276 aa11.64□□□□□ -0.55
CXXC1-211ENST00000589548 LYRM1O43325 122 aa11.63□□□□□ -0.55
CXXC1-211ENST00000589548 GNG5P63218 68 aa11.63□□□□□ -0.55
CXXC1-211ENST00000589548 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
CXXC1-211ENST00000589548 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
CXXC1-211ENST00000589548 NMES1Q9C002 83 aa11.63□□□□□ -0.55
CXXC1-211ENST00000589548 IGKV2D-24A0A075B6R9 120 aa11.62□□□□□ -0.55
CXXC1-211ENST00000589548 IGLV2-11P01706 119 aa11.62□□□□□ -0.55
CXXC1-211ENST00000589548 RNASE3P12724 160 aaKnown RBP11.62□□□□□ -0.55
CXXC1-211ENST00000589548 CMTM2Q8TAZ6 248 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms