RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 C3orf56Q8N813 242 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 AP5S1Q9NUS5 200 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 SMPXQ9UHP9 88 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 HSPB8Q9UJY1 196 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 LAMTOR2Q9Y2Q5 125 aa7.56□□□□□ -1.2
VPS25-202ENST00000589219 C2orf70A6NJV1 201 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 D6R8Y8 96 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 LEPROTL1O95214 131 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 ID1P41134 155 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 CACNG7P62955 275 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 TWIST1Q15672 202 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 KLHDC1Q8N7A1 406 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 MYOZ3Q8TDC0 251 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 C20orf173Q96LM9 149 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 PRELID3AQ96N28 172 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 MIEN1Q9BRT3 115 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 RHPN1-AS1Q9BWJ2 59 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 PAM16Q9Y3D7 125 aa7.55□□□□□ -1.2
VPS25-202ENST00000589219 TRAV21A0A0B4J279 112 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 M0QZ24 198 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 CRXO43186 299 aaPredicted RBP7.54□□□□□ -1.2
VPS25-202ENST00000589219 SNAI2O43623 268 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 LGALS1P09382 135 aaKnown RBP7.54□□□□□ -1.2
VPS25-202ENST00000589219 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 MRPL51Q4U2R6 128 aaKnown RBP7.54□□□□□ -1.2
VPS25-202ENST00000589219 SPATA45Q537H7 98 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 EBLN2Q6P2I7 272 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 PET117Q6UWS5 81 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 SMIM15Q7Z3B0 74 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 AMN1Q8IY45 258 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 RNF152Q8N8N0 203 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 OR10AG1Q8NH19 301 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 PRSS3P2Q8NHM4 247 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 C2orf88Q9BSF0 95 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 ZNF702PQ9H963 129 aa7.54□□□□□ -1.2
VPS25-202ENST00000589219 TENM1Q9UKZ4 2725 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 IGHV4-4A0A075B6R2 117 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 IGKV3D-20A0A0C4DH25 116 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 PRR31Q5SQ13 230 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 APRG1Q8IVJ8 170 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 TMEM86BQ8N661 226 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 OR8A1Q8NGG7 326 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 FAM19A4Q96LR4 140 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 MAP1LC3CQ9BXW4 147 aa7.53□□□□□ -1.2
VPS25-202ENST00000589219 TRAV9-2A0A087WT02 112 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 LGALS9O00182 355 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 CSN3P07498 182 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 CKS2P33552 79 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 TM4SF20Q53R12 229 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 Q8N2B8 174 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 ODF3Q96PU9 254 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 MAP1LC3AQ9H492 121 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 UQCR10Q9UDW1 63 aa7.52□□□□□ -1.21
VPS25-202ENST00000589219 M0R143 59 aa7.51□□□□□ -1.21
VPS25-202ENST00000589219 HOXA3O43365 443 aaPredicted RBP7.51□□□□□ -1.21
VPS25-202ENST00000589219 RPL11P62913 178 aaKnown RBP7.51□□□□□ -1.21
VPS25-202ENST00000589219 ZNF705AQ6ZN79 300 aaPredicted RBP7.51□□□□□ -1.21
VPS25-202ENST00000589219 ZNF575Q86XF7 245 aa7.51□□□□□ -1.21
VPS25-202ENST00000589219 RNF185Q96GF1 192 aa7.51□□□□□ -1.21
VPS25-202ENST00000589219 UBE2E2Q96LR5 201 aa7.51□□□□□ -1.21
VPS25-202ENST00000589219 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
VPS25-202ENST00000589219 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
VPS25-202ENST00000589219 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 OR4C46A6NHA9 309 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 NPYP01303 97 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 HBDP02042 147 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
VPS25-202ENST00000589219 IGLC3P0DOY3 106 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 ASIPP42127 132 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 TDRG1Q3Y452 100 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 PRR9Q5T870 116 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 SPATA12Q7Z6I5 190 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 NXT2Q9NPJ8 142 aaKnown RBP7.5□□□□□ -1.21
VPS25-202ENST00000589219 ESM1Q9NQ30 184 aa7.5□□□□□ -1.21
VPS25-202ENST00000589219 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 HSBP1L1C9JCN9 74 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 H3BVH4 76 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 EREGO14944 169 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 IFI27P40305 119 aaPredicted RBP7.49□□□□□ -1.21
VPS25-202ENST00000589219 LEPP41159 167 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 SNRPD3P62318 126 aaKnown RBP7.49□□□□□ -1.21
VPS25-202ENST00000589219 MUC21Q5SSG8 566 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 SPANXN1Q5VSR9 72 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 SHISA2Q6UWI4 295 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 DCANP1Q8TF63 244 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 MRAP2Q96G30 205 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 ZNF747Q9BV97 191 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 ST20Q9HBF5 79 aa7.49□□□□□ -1.21
VPS25-202ENST00000589219 IGHV4OR15-8A0A075B7B6 117 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 A0A087WW49 117 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 KLLNB2CW77 178 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 NCR2O95944 276 aa7.48□□□□□ -1.21
VPS25-202ENST00000589219 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms