RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 GNRH2O43555 120 aa9.36□□□□□ -0.91
VMP1-209ENST00000588915 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
VMP1-209ENST00000588915 KHDC3LQ587J8 217 aa9.36□□□□□ -0.91
VMP1-209ENST00000588915 Q8N814 137 aa9.36□□□□□ -0.91
VMP1-209ENST00000588915 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
VMP1-209ENST00000588915 ATP5SQ99766 215 aa9.36□□□□□ -0.91
VMP1-209ENST00000588915 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
VMP1-209ENST00000588915 LOC100131303A0A0U1RQF7 123 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 PPT1P50897 306 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 LAGE3Q14657 143 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 MZT2BQ6NZ67 158 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 CMTM2Q8TAZ6 248 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 TM2D2Q9BX73 214 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 SDF2L1Q9HCN8 221 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 NAGKQ9UJ70 344 aa9.35□□□□□ -0.91
VMP1-209ENST00000588915 PGPA6NDG6 321 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 FBLL1A6NHQ2 334 aaKnown RBP9.34□□□□□ -0.91
VMP1-209ENST00000588915 H0YIZ8 118 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 RHOHQ15669 191 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 OR10J3Q5JRS4 329 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 LINC00299Q6ZSB3 139 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 HYLS1Q96M11 299 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 OR5AC2Q9NZP5 309 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 NDUFA13Q9P0J0 144 aa9.34□□□□□ -0.91
VMP1-209ENST00000588915 J3QL48 77 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 TYMSP04818 313 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 FFAR4Q5NUL3 377 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 LELP1Q5T871 98 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 PQLC2Q6ZP29 291 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 SLC25A29Q8N8R3 303 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 PTH2Q96A98 100 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 TREM1Q9NP99 234 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 MBD2Q9UBB5 411 aa9.33□□□□□ -0.92
VMP1-209ENST00000588915 RS1O15537 224 aa9.32□□□□□ -0.92
VMP1-209ENST00000588915 PLA2G1BP04054 148 aaKnown RBP9.32□□□□□ -0.92
VMP1-209ENST00000588915 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
VMP1-209ENST00000588915 ASB13Q8WXK3 278 aa9.32□□□□□ -0.92
VMP1-209ENST00000588915 GTSF1LQ9H1H1 148 aa9.32□□□□□ -0.92
VMP1-209ENST00000588915 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
VMP1-209ENST00000588915 SERTM2A0A1B0GWG4 89 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 SIX6O95475 246 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 HAMPP81172 84 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 ASAH1Q13510 395 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 LRRC37A5PQ49AS3 106 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 GOLT1AQ6ZVE7 132 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 TVP23CQ96ET8 276 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 Q9HAA7 133 aa9.31□□□□□ -0.92
VMP1-209ENST00000588915 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
VMP1-209ENST00000588915 Q6ZSA8 131 aa9.3□□□□□ -0.92
VMP1-209ENST00000588915 PPP1R1CQ8WVI7 109 aa9.3□□□□□ -0.92
VMP1-209ENST00000588915 HSPB11Q9Y547 144 aa9.3□□□□□ -0.92
VMP1-209ENST00000588915 TRAV8-3A0A0A6YYJ7 113 aa9.29□□□□□ -0.92
VMP1-209ENST00000588915 TAAR5O14804 337 aa9.29□□□□□ -0.92
VMP1-209ENST00000588915 PET100P0DJ07 73 aa9.29□□□□□ -0.92
VMP1-209ENST00000588915 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
VMP1-209ENST00000588915 ACOT6Q3I5F7 207 aaPredicted RBP9.29□□□□□ -0.92
VMP1-209ENST00000588915 ATP6V0E2Q8NHE4 81 aa9.29□□□□□ -0.92
VMP1-209ENST00000588915 NDFIP1Q9BT67 221 aa9.29□□□□□ -0.92
VMP1-209ENST00000588915 TRAV8-1A0A0A6YYK1 113 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 A0A1W2PPV4 95 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 F6UZH7 168 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 IGHV3-30P01768 117 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 IGHV3-33P01772 117 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 IGHV3-30-5P0DP03 117 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 ENKURQ8TC29 256 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 S100ZQ8WXG8 99 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 RPH3ALQ9UNE2 315 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
VMP1-209ENST00000588915 MPC2O95563 127 aa9.27□□□□□ -0.93
VMP1-209ENST00000588915 RPL12P30050 165 aaKnown RBP9.27□□□□□ -0.93
VMP1-209ENST00000588915 H2BFSP57053 126 aa9.27□□□□□ -0.93
VMP1-209ENST00000588915 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
VMP1-209ENST00000588915 DPPA3Q6W0C5 159 aa9.27□□□□□ -0.93
VMP1-209ENST00000588915 K7EQM0 130 aa9.26□□□□□ -0.93
VMP1-209ENST00000588915 ZFP2Q6ZN57 461 aa9.26□□□□□ -0.93
VMP1-209ENST00000588915 C11orf21Q9P2W6 132 aa9.26□□□□□ -0.93
VMP1-209ENST00000588915 A0A087WWC5 75 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 INMT-MINDY4F8WBC2 141 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 GCGP01275 180 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 ZNF506Q5JVG8 444 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 C5orf17Q8NAS9 161 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 SUN5Q8TC36 379 aa9.25□□□□□ -0.93
VMP1-209ENST00000588915 IGHV3-73A0A0B4J1V6 119 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 A8MWV9 139 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 GGTLC3B5MD39 225 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
VMP1-209ENST00000588915 TCRAP04437 139 aa9.24□□□□□ -0.93
VMP1-209ENST00000588915 RNASE3P12724 160 aaKnown RBP9.24□□□□□ -0.93
VMP1-209ENST00000588915 ZNF80P51504 273 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms