RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 GDF5OSQ5U4N7 250 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 FRZBQ92765 325 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 HIST1H2BAQ96A08 127 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 TVP23CQ96ET8 276 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 LINC00479Q96M42 142 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 TCEAL7Q9BRU2 100 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 DERL1Q9BUN8 251 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 PRELID1Q9Y255 219 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 LINC00588Q9Y4M8 146 aa5.99□□□□□ -1.45
SDF2-204ENST00000587338 IGKV2-40A0A087WW87 121 aaPredicted RBP5.98□□□□□ -1.45
SDF2-204ENST00000587338 TRAV8-2A0A0B4J237 113 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 DIRC3C9JPN6 131 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 F5H768 121 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 NDUFS6O75380 124 aaKnown RBP5.98□□□□□ -1.45
SDF2-204ENST00000587338 IGKV2D-40P01614 121 aaPredicted RBP5.98□□□□□ -1.45
SDF2-204ENST00000587338 MGST1P10620 155 aaKnown RBP5.98□□□□□ -1.45
SDF2-204ENST00000587338 RPL35P42766 123 aaKnown RBP5.98□□□□□ -1.45
SDF2-204ENST00000587338 GNG4P50150 75 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 ADIRFQ15847 76 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 PSG3Q16557 428 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 TMEM241Q24JQ0 296 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 RRN3P1Q2M238 152 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 CENPWQ5EE01 88 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 SAMD13Q5VXD3 122 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 PRNTQ86SH4 94 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 OR4B1Q8NGF8 309 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 C11orf52Q96A22 123 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 KRTAP1-5Q9BYS1 174 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 NAT8Q9UHE5 227 aa5.98□□□□□ -1.45
SDF2-204ENST00000587338 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 TRAV8-1A0A0A6YYK1 113 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 PGPEP1LA6NFU8 196 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 PRAC2D3DTV9 90 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 ISLRO14498 428 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 S100A9P06702 114 aaKnown RBP5.97□□□□□ -1.45
SDF2-204ENST00000587338 DEFB130BP0DP73 79 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 DEFB130AP0DP74 79 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 BTF3P20290 206 aaKnown RBP5.97□□□□□ -1.45
SDF2-204ENST00000587338 TMEM183BQ1AE95 376 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 TTC32Q5I0X7 151 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 BAGE2Q86Y30 109 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 C1orf158Q8N1D5 194 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 SVBPQ8N300 66 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 NHLRC2Q8NBF2 726 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 MRPL53Q96EL3 112 aaKnown RBP5.97□□□□□ -1.45
SDF2-204ENST00000587338 FMC1Q96HJ9 113 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 C20orf173Q96LM9 149 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 TMEM208Q9BTX3 173 aa5.97□□□□□ -1.45
SDF2-204ENST00000587338 SAV1Q9H4B6 383 aaPredicted RBP5.97□□□□□ -1.45
SDF2-204ENST00000587338 CARHSP1Q9Y2V2 147 aaKnown RBP5.97□□□□□ -1.45
SDF2-204ENST00000587338 SERTM2A0A1B0GWG4 89 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 J3QL48 77 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 SOCS3O14543 225 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 SNAPINO95295 136 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 FUSP35637 526 aaKnown RBP eCLIP5.96□□□□□ -1.46
SDF2-204ENST00000587338 XGP55808 180 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 TAS2R60P59551 318 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 FLI1Q01543 452 aaPredicted RBP5.96□□□□□ -1.46
SDF2-204ENST00000587338 HIST1H1AQ02539 215 aaPredicted RBP5.96□□□□□ -1.46
SDF2-204ENST00000587338 ERCC8Q13216 396 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 C10orf91Q5T1B1 145 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 TMEM78Q5T7P6 136 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 FOXI2Q6ZQN5 318 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 OR10J6PQ8NGY7 276 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 Q9H8V8 135 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 SDF2L1Q9HCN8 221 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 RPS10P5Q9NQ39 176 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 PSG8Q9UQ74 426 aa5.96□□□□□ -1.46
SDF2-204ENST00000587338 LYRM9A8MSI8 78 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 C9JCJ5 164 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 F6UB75 175 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 RPL23P62829 140 aaKnown RBP5.95□□□□□ -1.46
SDF2-204ENST00000587338 PNRC1Q12796 327 aaPredicted RBP5.95□□□□□ -1.46
SDF2-204ENST00000587338 PRR27Q6MZM9 219 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 EBLN2Q6P2I7 272 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 Q86TA4 180 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 TMEM75Q8N9X5 138 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 CLRN3Q8NCR9 226 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 OCC1Q8TAD7 63 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 Q8TAT8 98 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 VGLL1Q99990 258 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 NDFIP1Q9BT67 221 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 PPP1R14DQ9NXH3 145 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 MDFICQ9P1T7 246 aa5.95□□□□□ -1.46
SDF2-204ENST00000587338 TRBV20OR9-2A0A075B6H5 130 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 ZNF705GA8MUZ8 300 aaPredicted RBP5.94□□□□□ -1.46
SDF2-204ENST00000587338 J3KRW8 73 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 PRM2P04554 102 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 ATP5G1P05496 136 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 OR5I1Q13606 314 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 ATRAIDQ6UW56 229 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 LINC01551Q86U37 167 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 ARL6IP6Q8N6S5 226 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 IGF2BP2-AS1Q96M15 143 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 CLUHP3Q96NS8 147 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 AGPAT4-IT1Q9H0P7 198 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 KLF12Q9Y4X4 402 aa5.94□□□□□ -1.46
SDF2-204ENST00000587338 C7orf77A4D0Y5 90 aa5.93□□□□□ -1.46
SDF2-204ENST00000587338 RBAKDNA6NC62 111 aa5.93□□□□□ -1.46
SDF2-204ENST00000587338 FBLL1A6NHQ2 334 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms