RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RBMY1BA6NDE4 496 aaKnown RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 RBMY1EA6NEQ0 496 aaKnown RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIGD1CA8MV81 97 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 UBE2CO00762 179 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 SOCS3O14543 225 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BKO60814 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 LY6G6CO95867 125 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 APOHP02749 345 aaPredicted RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BJP06899 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 CSN3P07498 182 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 CD7P09564 240 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 RBMY1DP0C7P1 496 aaKnown RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BOP23527 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BBP33778 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 FOXA3P55318 350 aaPredicted RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BDP58876 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BCP62807 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H1AQ02539 215 aaPredicted RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 KLF5Q13887 457 aaPredicted RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST2H2BEQ16778 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 TM4SF20Q53R12 229 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 TCF24Q7RTU0 167 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 ZFP82Q8N141 532 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 OR2D3Q8NGH3 330 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 OR9G4Q8NGQ1 327 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 FRZBQ92765 325 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BHQ93079 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 NEU1Q99519 415 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BNQ99877 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 HIST1H2BMQ99879 126 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 IGHV3OR16-13A0A075B7E8 117 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 IGHV3-74A0A0B4J1X5 117 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 TRAV8-2A0A0B4J237 113 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 C5orf52A6NGY3 159 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 FABP5P3A8MUU1 101 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 SNURFLB1AK76 121 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 TRGC1P0CF51 173 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 HBBP68871 147 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 RIGQ13278 110 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 NUP35Q8NFH5 326 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 SGK494Q96LW2 274 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 ODF3Q96PU9 254 aa5.8□□□□□ -1.48
VMP1-204ENST00000587259 TMEM189A5PLL7 270 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 C2orf70A6NJV1 201 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 F2Z2F3 143 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 PAX4O43316 350 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 SH2D1AO60880 128 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 CBLN1P23435 193 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 S100A2P29034 98 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 TCL1AP56279 114 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 RAB4BP61018 213 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 FABP9Q0Z7S8 132 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 CD300EQ496F6 205 aaPredicted RBP5.79□□□□□ -1.48
VMP1-204ENST00000587259 COA6Q5JTJ3 125 aaKnown RBP5.79□□□□□ -1.48
VMP1-204ENST00000587259 LINC00322Q6ZN03 302 aaPredicted RBP5.79□□□□□ -1.48
VMP1-204ENST00000587259 GTSCR1Q86UQ5 136 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 RNF182Q8N6D2 247 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 DYNLRB2Q8TF09 96 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 LINC00476Q8WZB0 136 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 VGLL1Q99990 258 aa5.79□□□□□ -1.48
VMP1-204ENST00000587259 TRAV25A0A0B4J276 109 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 A0A1B0GUT8 65 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 ZNF705FA8MVS1 300 aaPredicted RBP5.78□□□□□ -1.48
VMP1-204ENST00000587259 PHOX2AO14813 284 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 DUSP14O95147 198 aaKnown RBP5.78□□□□□ -1.48
VMP1-204ENST00000587259 CA1P00915 261 aaPredicted RBP5.78□□□□□ -1.48
VMP1-204ENST00000587259 NDUFA6P56556 154 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 SNRPEP62304 92 aaKnown RBP5.78□□□□□ -1.48
VMP1-204ENST00000587259 OR10J3Q5JRS4 329 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 CDPF1Q6NVV7 123 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 MRPL54Q6P161 138 aaKnown RBP5.78□□□□□ -1.48
VMP1-204ENST00000587259 OR8A1Q8NGG7 326 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 Q8TAT8 98 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 DCANP1Q8TF63 244 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 C8orf49Q96NF6 230 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 SIGLEC8Q9NYZ4 499 aa5.78□□□□□ -1.48
VMP1-204ENST00000587259 TRAV21A0A0B4J279 112 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 A0A1B0GXF2 115 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 K7EQG2 157 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 APCSP02743 223 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 CRISP2P16562 243 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 HOXA5P20719 270 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 HLA-DMBP28068 263 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 TSPOP30536 169 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 CTRLP40313 264 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 LEPP41159 167 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 CMC4P56277 68 aaPredicted RBP5.77□□□□□ -1.49
VMP1-204ENST00000587259 EBLN2Q6P2I7 272 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 TMEM136Q6ZRR5 245 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 GATD1Q8NB37 220 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 SPAG8Q99932 426 aaPredicted RBP5.77□□□□□ -1.49
VMP1-204ENST00000587259 AGPAT4-IT1Q9H0P7 198 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 MS4A6AQ9H2W1 248 aa5.77□□□□□ -1.49
VMP1-204ENST00000587259 OR4C46A6NHA9 309 aa5.76□□□□□ -1.49
VMP1-204ENST00000587259 OR11H12B2RN74 326 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms