RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SFTA3P0C7M3 94 aa12.22□□□□□ -0.45
TPM4-206ENST00000587201 CRYBA4P53673 196 aa12.22□□□□□ -0.45
TPM4-206ENST00000587201 ZNF726P1Q15940 193 aa12.22□□□□□ -0.45
TPM4-206ENST00000587201 TTC32Q5I0X7 151 aa12.22□□□□□ -0.45
TPM4-206ENST00000587201 AKR1C8PQ5T2L2 129 aa12.22□□□□□ -0.45
TPM4-206ENST00000587201 ZNF479Q96JC4 524 aa12.22□□□□□ -0.45
TPM4-206ENST00000587201 KCNS1Q96KK3 526 aa12.22□□□□□ -0.45
TPM4-206ENST00000587201 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
TPM4-206ENST00000587201 A0A1W2PRE2 83 aa12.21□□□□□ -0.45
TPM4-206ENST00000587201 FLI1Q01543 452 aaPredicted RBP12.21□□□□□ -0.45
TPM4-206ENST00000587201 PRNTQ86SH4 94 aa12.21□□□□□ -0.45
TPM4-206ENST00000587201 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.45
TPM4-206ENST00000587201 SMLR1H3BR10 107 aa12.2□□□□□ -0.46
TPM4-206ENST00000587201 M0R2P5 195 aa12.2□□□□□ -0.46
TPM4-206ENST00000587201 ZFP69Q49AA0 526 aa12.2□□□□□ -0.46
TPM4-206ENST00000587201 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
TPM4-206ENST00000587201 PKHD1P08F94 4074 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 GCGP01275 180 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 ZNF80P51504 273 aaPredicted RBP12.19□□□□□ -0.46
TPM4-206ENST00000587201 FGF8P55075 233 aaPredicted RBP12.19□□□□□ -0.46
TPM4-206ENST00000587201 UBE2G2P60604 165 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 TNP2Q05952 138 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 MRPL23Q16540 153 aaKnown RBP12.19□□□□□ -0.46
TPM4-206ENST00000587201 SMUG1Q53HV7 270 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 OR4C5Q8NGB2 326 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 CYTL1Q9NRR1 136 aa12.19□□□□□ -0.46
TPM4-206ENST00000587201 HERC2O95714 4834 aa12.18□□□□□ -0.46
TPM4-206ENST00000587201 PKD1P98161 4303 aa12.18□□□□□ -0.46
TPM4-206ENST00000587201 TRAV4A0A0B4J268 109 aa12.18□□□□□ -0.46
TPM4-206ENST00000587201 FBLL1A6NHQ2 334 aaKnown RBP12.18□□□□□ -0.46
TPM4-206ENST00000587201 IFNA7P01567 189 aa12.18□□□□□ -0.46
TPM4-206ENST00000587201 PFN1P07737 140 aaKnown RBP12.18□□□□□ -0.46
TPM4-206ENST00000587201 KRTAP1-5Q9BYS1 174 aa12.18□□□□□ -0.46
TPM4-206ENST00000587201 A0A1W2PPQ1 181 aa12.17□□□□□ -0.46
TPM4-206ENST00000587201 SAPCD1Q5SSQ6 148 aa12.17□□□□□ -0.46
TPM4-206ENST00000587201 PCNPQ8WW12 178 aaKnown RBP12.17□□□□□ -0.46
TPM4-206ENST00000587201 C11orf21Q9P2W6 132 aa12.17□□□□□ -0.46
TPM4-206ENST00000587201 DNAH11Q96DT5 4516 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 K7EQD1 137 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 SIVA1O15304 175 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 NXPH4O95158 308 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 GYPEP15421 78 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 SRIP30626 198 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 PPT1P50897 306 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 NEGR1Q7Z3B1 354 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 LINC00479Q96M42 142 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
TPM4-206ENST00000587201 FAM74A7A6NL05 159 aa12.15□□□□□ -0.46
TPM4-206ENST00000587201 C9JCJ5 164 aa12.15□□□□□ -0.46
TPM4-206ENST00000587201 PEX7O00628 323 aa12.15□□□□□ -0.46
TPM4-206ENST00000587201 ORM1P02763 201 aa12.15□□□□□ -0.46
TPM4-206ENST00000587201 KCNRGQ8N5I3 272 aa12.15□□□□□ -0.46
TPM4-206ENST00000587201 NKX6-2Q9C056 277 aaPredicted RBP12.15□□□□□ -0.46
TPM4-206ENST00000587201 MED14OSP0DP75 135 aa12.14□□□□□ -0.47
TPM4-206ENST00000587201 ZNF345Q14585 488 aa12.14□□□□□ -0.47
TPM4-206ENST00000587201 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
TPM4-206ENST00000587201 DYNC1H1Q14204 4646 aaKnown RBP12.14□□□□□ -0.47
TPM4-206ENST00000587201 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
TPM4-206ENST00000587201 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
TPM4-206ENST00000587201 STOML3Q8TAV4 291 aa12.13□□□□□ -0.47
TPM4-206ENST00000587201 HIST1H2BAQ96A08 127 aa12.13□□□□□ -0.47
TPM4-206ENST00000587201 KIAA1109Q2LD37 5005 aa12.13□□□□□ -0.47
TPM4-206ENST00000587201 HMSDA8MTL9 139 aa12.12□□□□□ -0.47
TPM4-206ENST00000587201 Q86TA4 180 aa12.12□□□□□ -0.47
TPM4-206ENST00000587201 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
TPM4-206ENST00000587201 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
TPM4-206ENST00000587201 TXNDC17Q9BRA2 123 aa12.12□□□□□ -0.47
TPM4-206ENST00000587201 A0A0D9SG52 128 aa12.11□□□□□ -0.47
TPM4-206ENST00000587201 KANTRA0A1W2PQU2 76 aa12.11□□□□□ -0.47
TPM4-206ENST00000587201 FABP5P3A8MUU1 101 aa12.11□□□□□ -0.47
TPM4-206ENST00000587201 BTF3P20290 206 aaKnown RBP12.11□□□□□ -0.47
TPM4-206ENST00000587201 FHITP49789 147 aa12.11□□□□□ -0.47
TPM4-206ENST00000587201 ZNF471Q9BX82 626 aaPredicted RBP12.11□□□□□ -0.47
TPM4-206ENST00000587201 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 RS1O15537 224 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 SEC11BP0C7V7 166 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 RNASE3P12724 160 aaKnown RBP12.1□□□□□ -0.47
TPM4-206ENST00000587201 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
TPM4-206ENST00000587201 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
TPM4-206ENST00000587201 LINC00315P59091 139 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 UBE2G1P62253 170 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 CST9LP1Q5W188 147 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
TPM4-206ENST00000587201 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 BCL2L11O43521 198 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 CIDEAO60543 219 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 ZNF506Q5JVG8 444 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 NHLRC2Q8NBF2 726 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 FMC1Q96HJ9 113 aa12.09□□□□□ -0.47
TPM4-206ENST00000587201 IGHV3-73A0A0B4J1V6 119 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 C16orf90A8MZG2 172 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 UMAD1C9J7I0 102 aa12.08□□□□□ -0.48
TPM4-206ENST00000587201 ASIPP42127 132 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms