RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 NOP10Q9NPE3 64 aaKnown RBP13.68□□□□□ -0.22
DDX39A-204ENST00000586558 GSN-AS1Q9NRJ2 163 aa13.68□□□□□ -0.22
DDX39A-204ENST00000586558 C11orf21Q9P2W6 132 aa13.68□□□□□ -0.22
DDX39A-204ENST00000586558 TP53TG3Q9ULZ0 132 aa13.68□□□□□ -0.22
DDX39A-204ENST00000586558 SH2D1AO60880 128 aa13.67□□□□□ -0.22
DDX39A-204ENST00000586558 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
DDX39A-204ENST00000586558 C12orf74Q32Q52 190 aa13.67□□□□□ -0.22
DDX39A-204ENST00000586558 NHLRC2Q8NBF2 726 aa13.67□□□□□ -0.22
DDX39A-204ENST00000586558 CRIP1P50238 77 aa13.66□□□□□ -0.22
DDX39A-204ENST00000586558 DAD1P61803 113 aa13.66□□□□□ -0.22
DDX39A-204ENST00000586558 RAB19A4D1S5 217 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 NUPR2A6NF83 97 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 C9JCJ5 164 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 IFITM2Q01629 132 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 CLLU1Q5K131 121 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 Q6ZTC4 211 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 SPXQ9BT56 116 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 PARLQ9H300 379 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 SMDT1Q9H4I9 107 aa13.65□□□□□ -0.22
DDX39A-204ENST00000586558 TRBV20OR9-2A0A075B6H5 130 aa13.64□□□□□ -0.23
DDX39A-204ENST00000586558 IGHV3-16A0A0C4DH30 117 aa13.64□□□□□ -0.23
DDX39A-204ENST00000586558 ORM1P02763 201 aa13.64□□□□□ -0.23
DDX39A-204ENST00000586558 TYMSP04818 313 aa13.64□□□□□ -0.23
DDX39A-204ENST00000586558 LINC00612Q8N6U2 182 aa13.64□□□□□ -0.23
DDX39A-204ENST00000586558 PHLDA1Q8WV24 401 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-204ENST00000586558 BIN3Q9NQY0 253 aa13.64□□□□□ -0.23
DDX39A-204ENST00000586558 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
DDX39A-204ENST00000586558 TRAV10A0A0B4J240 114 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 B4DEV8 164 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 GNRH2O43555 120 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 IGLV2-8P01709 118 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 DEFB130BP0DP73 79 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 DEFB130AP0DP74 79 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 PEA15Q15121 130 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 LGALS9BQ3B8N2 356 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 ZFAND6Q6FIF0 208 aa13.63□□□□□ -0.23
DDX39A-204ENST00000586558 IGKV3D-20A0A0C4DH25 116 aa13.62□□□□□ -0.23
DDX39A-204ENST00000586558 SPINK4O60575 86 aa13.62□□□□□ -0.23
DDX39A-204ENST00000586558 SRP19P09132 144 aaKnown RBP13.62□□□□□ -0.23
DDX39A-204ENST00000586558 LINC01559Q495D7 138 aa13.62□□□□□ -0.23
DDX39A-204ENST00000586558 CASC10Q5T4H9 136 aa13.62□□□□□ -0.23
DDX39A-204ENST00000586558 CEMP1Q6PRD7 247 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-204ENST00000586558 DNAH7Q8WXX0 4024 aa13.61□□□□□ -0.23
DDX39A-204ENST00000586558 KRBOX1C9JBD0 128 aa13.61□□□□□ -0.23
DDX39A-204ENST00000586558 MGST1P10620 155 aaKnown RBP13.61□□□□□ -0.23
DDX39A-204ENST00000586558 CEBPGP53567 150 aa13.61□□□□□ -0.23
DDX39A-204ENST00000586558 PRR27Q6MZM9 219 aa13.61□□□□□ -0.23
DDX39A-204ENST00000586558 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-204ENST00000586558 TRGV1A0A0A0MS02 117 aa13.6□□□□□ -0.23
DDX39A-204ENST00000586558 M0R036 132 aa13.6□□□□□ -0.23
DDX39A-204ENST00000586558 ASIPP42127 132 aa13.6□□□□□ -0.23
DDX39A-204ENST00000586558 Q6ZTI0 123 aa13.6□□□□□ -0.23
DDX39A-204ENST00000586558 C18orf15Q96N68 181 aa13.6□□□□□ -0.23
DDX39A-204ENST00000586558 SMIM7Q9BQ49 75 aa13.6□□□□□ -0.23
DDX39A-204ENST00000586558 DEFB131BA0A096LNP1 70 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 GAGE12BA1L429 117 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 GAGE7O76087 117 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 ATP5G1P05496 136 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 GAGE12FP0CL80 117 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 GAGE12GP0CL81 117 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 GAGE12IP0CL82 117 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 DNLZQ5SXM8 178 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 DAZAP1Q96EP5 407 aaKnown RBP13.59□□□□□ -0.23
DDX39A-204ENST00000586558 LY96Q9Y6Y9 160 aa13.59□□□□□ -0.23
DDX39A-204ENST00000586558 PGPEP1LA6NFU8 196 aa13.58□□□□□ -0.24
DDX39A-204ENST00000586558 M0R2P5 195 aa13.58□□□□□ -0.24
DDX39A-204ENST00000586558 CXCL1P09341 107 aa13.58□□□□□ -0.24
DDX39A-204ENST00000586558 S100A4P26447 101 aaKnown RBP13.58□□□□□ -0.24
DDX39A-204ENST00000586558 OR5I1Q13606 314 aa13.58□□□□□ -0.24
DDX39A-204ENST00000586558 FAM74A3Q4VXF1 159 aa13.58□□□□□ -0.24
DDX39A-204ENST00000586558 C9orf85Q96MD7 179 aa13.58□□□□□ -0.24
DDX39A-204ENST00000586558 TRGV2A0A075B6R0 118 aa13.57□□□□□ -0.24
DDX39A-204ENST00000586558 C19orf71A6NCJ1 209 aa13.57□□□□□ -0.24
DDX39A-204ENST00000586558 ZNF727A8MUV8 499 aa13.57□□□□□ -0.24
DDX39A-204ENST00000586558 RNASE3P12724 160 aaKnown RBP13.57□□□□□ -0.24
DDX39A-204ENST00000586558 SRSF3P84103 164 aaKnown RBP13.57□□□□□ -0.24
DDX39A-204ENST00000586558 RASL10AQ92737 203 aa13.57□□□□□ -0.24
DDX39A-204ENST00000586558 NDUFAF3Q9BU61 184 aa13.57□□□□□ -0.24
DDX39A-204ENST00000586558 MRPL16Q9NX20 251 aaKnown RBP13.57□□□□□ -0.24
DDX39A-204ENST00000586558 IL36BQ9NZH7 164 aa13.57□□□□□ -0.24
DDX39A-204ENST00000586558 C9JQL5 133 aa13.56□□□□□ -0.24
DDX39A-204ENST00000586558 OCC1Q8TAD7 63 aa13.56□□□□□ -0.24
DDX39A-204ENST00000586558 PTH2Q96A98 100 aa13.56□□□□□ -0.24
DDX39A-204ENST00000586558 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
DDX39A-204ENST00000586558 P01737 135 aa13.55□□□□□ -0.24
DDX39A-204ENST00000586558 HTN3P15516 51 aa13.55□□□□□ -0.24
DDX39A-204ENST00000586558 TMSB15BA0A087X1C1 80 aa13.54□□□□□ -0.24
DDX39A-204ENST00000586558 GRIFINA4D1Z8 144 aa13.54□□□□□ -0.24
DDX39A-204ENST00000586558 K7EN84 100 aa13.54□□□□□ -0.24
DDX39A-204ENST00000586558 MED14OSP0DP75 135 aa13.54□□□□□ -0.24
DDX39A-204ENST00000586558 TCTAP57738 103 aa13.54□□□□□ -0.24
DDX39A-204ENST00000586558 RPS20P60866 119 aaKnown RBP13.54□□□□□ -0.24
DDX39A-204ENST00000586558 PIK3CD-AS1Q5SR53 167 aa13.54□□□□□ -0.24
DDX39A-204ENST00000586558 ZNF575Q86XF7 245 aa13.54□□□□□ -0.24
DDX39A-204ENST00000586558 XKRY2A2RUG3 117 aa13.53□□□□□ -0.24
DDX39A-204ENST00000586558 H3BVH4 76 aa13.53□□□□□ -0.24
DDX39A-204ENST00000586558 RPL19P84098 196 aaKnown RBP13.53□□□□□ -0.24
DDX39A-204ENST00000586558 ZNF876PQ49A33 203 aa13.53□□□□□ -0.24
DDX39A-204ENST00000586558 SOHLH1Q5JUK2 328 aa13.53□□□□□ -0.24
DDX39A-204ENST00000586558 OR2D3Q8NGH3 330 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms