RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 EIF3GO75821 320 aaKnown RBP eCLIP7.96□□□□□ -1.14
LIG3-207ENST00000586119 CSN1S1P47710 185 aa7.96□□□□□ -1.14
LIG3-207ENST00000586119 XGP55808 180 aa7.96□□□□□ -1.14
LIG3-207ENST00000586119 RANP62826 216 aaKnown RBP7.96□□□□□ -1.14
LIG3-207ENST00000586119 TTC32Q5I0X7 151 aa7.96□□□□□ -1.14
LIG3-207ENST00000586119 ALKAL2Q6UX46 152 aa7.96□□□□□ -1.14
LIG3-207ENST00000586119 C11orf72Q8NBR9 251 aa7.96□□□□□ -1.14
LIG3-207ENST00000586119 KLF12Q9Y4X4 402 aa7.96□□□□□ -1.14
LIG3-207ENST00000586119 A0A1W2PPQ1 181 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 NPIPB6E9PJ23 425 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 M0R3E3 92 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 FGF8P55075 233 aaPredicted RBP7.95□□□□□ -1.14
LIG3-207ENST00000586119 DAZ2Q13117 558 aaKnown RBP7.95□□□□□ -1.14
LIG3-207ENST00000586119 ICAM4Q14773 271 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 IQCF2Q8IXL9 164 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 EXOC3-AS1Q8N2X6 119 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 EIF4E3Q8N5X7 224 aaKnown RBP7.95□□□□□ -1.14
LIG3-207ENST00000586119 CMTM2Q8TAZ6 248 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 TCEAL7Q9BRU2 100 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 TP53TG3Q9ULZ0 132 aa7.95□□□□□ -1.14
LIG3-207ENST00000586119 SERTM2A0A1B0GWG4 89 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 RBAKDNA6NC62 111 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 PGPA6NDG6 321 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 H3BNG1 76 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 ZNF324O75467 553 aaPredicted RBP7.94□□□□□ -1.14
LIG3-207ENST00000586119 IGHV3-53P01767 116 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 SLC25A5P05141 298 aaKnown RBP7.94□□□□□ -1.14
LIG3-207ENST00000586119 BTN1A1Q13410 526 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 C5orf17Q8NAS9 161 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
LIG3-207ENST00000586119 TRGV2A0A075B6R0 118 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 TRGV1A0A0A0MS02 117 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 LOC105371267A0A1B0GV96 52 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 FAM74A7A6NL05 159 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 DNAH10OSP0CZ25 163 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 RNASE4P34096 147 aaKnown RBP7.93□□□□□ -1.14
LIG3-207ENST00000586119 TAGLN2P37802 199 aaKnown RBP7.93□□□□□ -1.14
LIG3-207ENST00000586119 LEPP41159 167 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 KRTAP10-1P60331 282 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 LYPD6BQ8NI32 183 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 LINC00477Q96M19 166 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 ODF3Q96PU9 254 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 TXNDC17Q9BRA2 123 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 PYGO2Q9BRQ0 406 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 AGPAT4-IT1Q9H0P7 198 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 MANBALQ9NQG1 85 aa7.93□□□□□ -1.14
LIG3-207ENST00000586119 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
LIG3-207ENST00000586119 C7orf71A4D174 169 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 FBLL1A6NHQ2 334 aaKnown RBP7.92□□□□□ -1.14
LIG3-207ENST00000586119 DIRC3C9JPN6 131 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 SIVA1O15304 175 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 NXPH4O95158 308 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 IFNA1P01562 189 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 SUMO1P63165 101 aaKnown RBP7.92□□□□□ -1.14
LIG3-207ENST00000586119 PRR9Q5T870 116 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 C9orf47Q6ZRZ4 202 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 MRPL16Q9NX20 251 aaKnown RBP7.92□□□□□ -1.14
LIG3-207ENST00000586119 EPDR1Q9UM22 224 aa7.92□□□□□ -1.14
LIG3-207ENST00000586119 FLG2Q5D862 2391 aaPredicted RBP7.91□□□□□ -1.14
LIG3-207ENST00000586119 TRBV7-9A0A0J9YWB2 115 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 KLLNB2CW77 178 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 GGTLC3B5MD39 225 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 F6UZH7 168 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 K7EQM0 130 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 SPINK4O60575 86 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 HAMPP81172 84 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 LYPD5Q6UWN5 251 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 HIST1H2BAQ96A08 127 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 PGPEP1Q9NXJ5 209 aa7.91□□□□□ -1.14
LIG3-207ENST00000586119 A0A1B0GV50 99 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 PAX4O43316 350 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 PAGE4O60829 102 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 SMR3BP02814 79 aaPredicted RBP7.9□□□□□ -1.14
LIG3-207ENST00000586119 TCRAP04437 139 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 NMBP08949 121 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 UBE2G2P60604 165 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 CCL20P78556 96 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 TMEM78Q5T7P6 136 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 CST9LP1Q5W188 147 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 C18orf15Q96N68 181 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 C8orf49Q96NF6 230 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 VGLL1Q99990 258 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 MDFICQ9P1T7 246 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 GNG13Q9P2W3 67 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 LENEPQ9Y5L5 61 aa7.9□□□□□ -1.14
LIG3-207ENST00000586119 DNAH8Q96JB1 4490 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 IGKV2-40A0A087WW87 121 aaPredicted RBP7.89□□□□□ -1.15
LIG3-207ENST00000586119 IGKV2D-40P01614 121 aaPredicted RBP7.89□□□□□ -1.15
LIG3-207ENST00000586119 ZNF138P52744 262 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 TCL1AP56279 114 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 FHL2Q14192 279 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 ANXA2RQ3ZCQ2 193 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 Q5VSD8 79 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 ZFAND2AQ8N6M9 145 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 CYB561D1Q8N8Q1 229 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 ICOSQ9Y6W8 199 aa7.89□□□□□ -1.15
LIG3-207ENST00000586119 MYCBP2O75592 4640 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms