RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 FAM19A2Q8N3H0 131 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 C4orf3Q8WVX3 66 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 DPF1Q92782 380 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 URB1-AS1Q96HZ7 61 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 MS4A6AQ9H2W1 248 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 YAE1D1Q9NRH1 226 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 IGKV3-7A0A075B6H7 116 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 TRAV2A0A0B4J234 112 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 KIR2DL5BA0A0G2JN68 375 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 KIR2DL5BA0A0G2JPC4 375 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 DNAJC9-AS1A6NH13 148 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 INAFM1C9JVW0 142 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 D6R8Y8 96 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 DUSP14O95147 198 aaKnown RBP8.48□□□□□ -1.05
LIG3-204ENST00000585740 DDTP30046 118 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 CKS2P33552 79 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 AMN1Q8IY45 258 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 KIR2DL5AQ8N109 375 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 PRSS3P2Q8NHM4 247 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 PRO1933Q9H354 126 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 TMEM160Q9NX00 188 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 C11orf21Q9P2W6 132 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 HSPB8Q9UJY1 196 aa8.48□□□□□ -1.05
LIG3-204ENST00000585740 LEPROTL1O95214 131 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
LIG3-204ENST00000585740 ASIPP42127 132 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 DEFA6Q01524 100 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 PRR9Q5T870 116 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 EBLN2Q6P2I7 272 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 Q6ZSV7 163 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 WFDC3Q8IUB2 231 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 VAMP8Q9BV40 100 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
LIG3-204ENST00000585740 IGHV1-24A0A0C4DH33 117 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 C20orf202A1L168 122 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 KLLNB2CW77 178 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 SRD5A1P18405 259 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 S100A4P26447 101 aaKnown RBP8.46□□□□□ -1.06
LIG3-204ENST00000585740 TSPOP30536 169 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 RNASE4P34096 147 aaKnown RBP8.46□□□□□ -1.06
LIG3-204ENST00000585740 KRTAP1-1Q07627 177 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 SPANXN1Q5VSR9 72 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 Q8N976 141 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 OR1N2Q8NGR9 330 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 OR10AG1Q8NH19 301 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 DUX5Q96PT3 197 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 C20orf144Q9BQM9 153 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 TMEM70Q9BUB7 260 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 MAP1LC3AQ9H492 121 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 HIVEP2P31629 2446 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 ZANQ9Y493 2812 aa8.46□□□□□ -1.06
LIG3-204ENST00000585740 MUC21A0A0G2JKD1 596 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 A0A0J9YX75 114 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 MUC21A0A140T8X8 626 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 F6UB75 175 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 TCF21O43680 179 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 CSN3P07498 182 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 EDN2P20800 178 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 SSTP61278 116 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 TCTEX1D4Q5JR98 221 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 PSMG4Q5JS54 123 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 PRR31Q5SQ13 230 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 MUC21Q5SSG8 566 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 TLN2Q9Y4G6 2542 aa8.45□□□□□ -1.06
LIG3-204ENST00000585740 H3BVH4 76 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
LIG3-204ENST00000585740 ZNF688P0C7X2 276 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 CD33P20138 364 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 TFPI2P48307 235 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 SLURP1P55000 103 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 ANXA2RQ3ZCQ2 193 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 PET117Q6UWS5 81 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 FOXI2Q6ZQN5 318 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 KLHL30-AS1Q8NEE0 82 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 OR11H1Q8NG94 326 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 OR9G4Q8NGQ1 327 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 ZNF418Q8TF45 676 aaPredicted RBP8.44□□□□□ -1.06
LIG3-204ENST00000585740 NDUFAF3Q9BU61 184 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 MAP1LC3CQ9BXW4 147 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 C16orf95Q9H693 158 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 SIGLEC8Q9NYZ4 499 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 RNF114Q9Y508 228 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 MXRA5Q9NR99 2828 aa8.44□□□□□ -1.06
LIG3-204ENST00000585740 C7orf71A4D174 169 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 J3KRW8 73 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 CRXO43186 299 aaPredicted RBP8.43□□□□□ -1.06
LIG3-204ENST00000585740 IFI27P40305 119 aaPredicted RBP8.43□□□□□ -1.06
LIG3-204ENST00000585740 CTAG1AP78358 180 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 FAM159AQ6UWV7 190 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 MRAP2Q96G30 205 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 NXT2Q9NPJ8 142 aaKnown RBP8.43□□□□□ -1.06
LIG3-204ENST00000585740 SCRT2Q9NQ03 307 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 PHLDA3Q9Y5J5 127 aa8.43□□□□□ -1.06
LIG3-204ENST00000585740 LINC01546A6NGU7 62 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms