RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 MUC21Q5SSG8 566 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 Q6AWC8 147 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 SSX7Q7RTT5 188 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 RAB24Q969Q5 203 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 TMEM167BQ9NRX6 74 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
SS18-225ENST00000585121 SLAQ13239 276 aa8.63□□□□□ -1.03
SS18-225ENST00000585121 UQCC3Q6UW78 93 aa8.63□□□□□ -1.03
SS18-225ENST00000585121 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
SS18-225ENST00000585121 NDFIP1Q9BT67 221 aa8.63□□□□□ -1.03
SS18-225ENST00000585121 TREM1Q9NP99 234 aa8.63□□□□□ -1.03
SS18-225ENST00000585121 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 CTXND1A0A1B0GTU2 59 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 CXorf1O96002 111 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 GCHFRP30047 84 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 TMEM183BQ1AE95 376 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 Q6ZQT7 251 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 IQCF2Q8IXL9 164 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 TMEM183AQ8IXX5 376 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 C5orf17Q8NAS9 161 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 SFT2D1Q8WV19 159 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 SPXQ9BT56 116 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 MRPL16Q9NX20 251 aaKnown RBP8.62□□□□□ -1.03
SS18-225ENST00000585121 NAGKQ9UJ70 344 aa8.62□□□□□ -1.03
SS18-225ENST00000585121 GNG5P63218 68 aa8.61□□□□□ -1.03
SS18-225ENST00000585121 SMDT1Q9H4I9 107 aa8.61□□□□□ -1.03
SS18-225ENST00000585121 Q9H8V8 135 aa8.61□□□□□ -1.03
SS18-225ENST00000585121 PAX4O43316 350 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 IGHV3-53P01767 116 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 ZNF726P1Q15940 193 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 TTC32Q5I0X7 151 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 SUN5Q8TC36 379 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 KCNS1Q96KK3 526 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
SS18-225ENST00000585121 TRAV8-1A0A0A6YYK1 113 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 TCRAP04437 139 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 SUMO1P63165 101 aaKnown RBP8.59□□□□□ -1.03
SS18-225ENST00000585121 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 FAM210AQ96ND0 272 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 SDF2L1Q9HCN8 221 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 ICOSQ9Y6W8 199 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 NACAE9PAV3 2078 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 TRGV4A0A0C4DH28 118 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 FBLL1A6NHQ2 334 aaKnown RBP8.59□□□□□ -1.03
SS18-225ENST00000585121 F6UZH7 168 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 ESRGQ1W209 222 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 C6orf223Q8N319 242 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 VSIG2Q96IQ7 327 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 UPK3BQ9BT76 320 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
SS18-225ENST00000585121 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
SS18-225ENST00000585121 A0A096LPF7 62 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 A0A1W2PRE2 83 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 KRBOX1C9JBD0 128 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 TAGLN2P37802 199 aaKnown RBP8.58□□□□□ -1.04
SS18-225ENST00000585121 PPT1P50897 306 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 CCL20P78556 96 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 PEA15Q15121 130 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 RASL10AQ92737 203 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 SGK494Q96LW2 274 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 C8orf49Q96NF6 230 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 PSG8Q9UQ74 426 aa8.58□□□□□ -1.04
SS18-225ENST00000585121 MUC4Q99102 2169 aa8.57□□□□□ -1.04
SS18-225ENST00000585121 RBFOX3A6NFN3 312 aa8.57□□□□□ -1.04
SS18-225ENST00000585121 M0R2P5 195 aa8.57□□□□□ -1.04
SS18-225ENST00000585121 GNRH2O43555 120 aa8.57□□□□□ -1.04
SS18-225ENST00000585121 FLI1Q01543 452 aaPredicted RBP8.57□□□□□ -1.04
SS18-225ENST00000585121 FHL2Q14192 279 aa8.57□□□□□ -1.04
SS18-225ENST00000585121 MRPL23Q16540 153 aaKnown RBP8.57□□□□□ -1.04
SS18-225ENST00000585121 TVP23CQ96ET8 276 aa8.57□□□□□ -1.04
SS18-225ENST00000585121 EIF5A2Q9GZV4 153 aaKnown RBP8.57□□□□□ -1.04
SS18-225ENST00000585121 PKHD1P08F94 4074 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 GGTLC3B5MD39 225 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 NDUFS6O75380 124 aaKnown RBP8.56□□□□□ -1.04
SS18-225ENST00000585121 IFNA1P01562 189 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 CRYBA4P53673 196 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 SMUG1Q53HV7 270 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 SAPCD1Q5SSQ6 148 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 PRNTQ86SH4 94 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 TMEM75Q8N9X5 138 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 OR4C5Q8NGB2 326 aa8.56□□□□□ -1.04
SS18-225ENST00000585121 NKX6-2Q9C056 277 aaPredicted RBP8.56□□□□□ -1.04
SS18-225ENST00000585121 DNAH11Q96DT5 4516 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 TRAV4A0A0B4J268 109 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 A0A1W2PPQ1 181 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 TMEM218A2RU14 115 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 GCGP01275 180 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 TYMSP04818 313 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 SFTA3P0C7M3 94 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 ZNF506Q5JVG8 444 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
SS18-225ENST00000585121 PKD1P98161 4303 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms