RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PRR9Q5T870 116 aa10.23□□□□□ -0.77
VAPA-209ENST00000585042 RASL10AQ92737 203 aa10.23□□□□□ -0.77
VAPA-209ENST00000585042 SPXQ9BT56 116 aa10.23□□□□□ -0.77
VAPA-209ENST00000585042 ORM1P02763 201 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 EIF5AP63241 154 aaKnown RBP10.22□□□□□ -0.77
VAPA-209ENST00000585042 AKR1C8PQ5T2L2 129 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 KCNRGQ8N5I3 272 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 CMTM2Q8TAZ6 248 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 RAB24Q969Q5 203 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 PHYHIPLQ96FC7 376 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 C8orf49Q96NF6 230 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 SH3BGRL3Q9H299 93 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 MRPL16Q9NX20 251 aaKnown RBP10.22□□□□□ -0.77
VAPA-209ENST00000585042 LY96Q9Y6Y9 160 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
VAPA-209ENST00000585042 TRGV4A0A0C4DH28 118 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 KANTRA0A1W2PQU2 76 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 CXorf1O96002 111 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 STAG3L2P0CL84 134 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 STAG3L3P0CL85 134 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 Q6AWC8 147 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 Q6ZNX1 250 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 OTORQ9NRC9 128 aa10.21□□□□□ -0.77
VAPA-209ENST00000585042 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.78
VAPA-209ENST00000585042 HMGB3O15347 200 aaKnown RBP10.2□□□□□ -0.78
VAPA-209ENST00000585042 PFDN1O60925 122 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 ARL14EPLP0DKL9 152 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 EVI2AP22794 236 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 SRIP30626 198 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 Q6ZQT7 251 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 SH2D6Q7Z4S9 175 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 ARL6IP6Q8N6S5 226 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 TMED6Q8WW62 240 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 TMEM167BQ9NRX6 74 aa10.2□□□□□ -0.78
VAPA-209ENST00000585042 TRGV11A0A075B6L2 103 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 A0A087WTM6 91 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 PGPA6NDG6 321 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 K7EQD1 137 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 XGP55808 180 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 TDRG1Q3Y452 100 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 FAM159AQ6UWV7 190 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 PCNPQ8WW12 178 aaKnown RBP10.19□□□□□ -0.78
VAPA-209ENST00000585042 HYLS1Q96M11 299 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 TXNDC17Q9BRA2 123 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 CYTL1Q9NRR1 136 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 MSRB1Q9NZV6 116 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 MDFICQ9P1T7 246 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 TNFRSF18Q9Y5U5 241 aa10.19□□□□□ -0.78
VAPA-209ENST00000585042 CTXND1A0A1B0GTU2 59 aa10.18□□□□□ -0.78
VAPA-209ENST00000585042 BCL2L11O43521 198 aa10.18□□□□□ -0.78
VAPA-209ENST00000585042 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
VAPA-209ENST00000585042 GCHFRP30047 84 aa10.18□□□□□ -0.78
VAPA-209ENST00000585042 C10orf126Q8N4M7 172 aa10.18□□□□□ -0.78
VAPA-209ENST00000585042 OR11H4Q8NGC9 324 aa10.18□□□□□ -0.78
VAPA-209ENST00000585042 ZNF479Q96JC4 524 aa10.18□□□□□ -0.78
VAPA-209ENST00000585042 ZNF471Q9BX82 626 aaPredicted RBP10.18□□□□□ -0.78
VAPA-209ENST00000585042 C9JCJ5 164 aa10.17□□□□□ -0.78
VAPA-209ENST00000585042 DIRC3C9JPN6 131 aa10.17□□□□□ -0.78
VAPA-209ENST00000585042 K7EQM0 130 aa10.17□□□□□ -0.78
VAPA-209ENST00000585042 GYPEP15421 78 aa10.17□□□□□ -0.78
VAPA-209ENST00000585042 TCTE3Q8IZS6 198 aa10.17□□□□□ -0.78
VAPA-209ENST00000585042 Q8TAT8 98 aa10.17□□□□□ -0.78
VAPA-209ENST00000585042 STOML3Q8TAV4 291 aa10.17□□□□□ -0.78
VAPA-209ENST00000585042 TRAV4A0A0B4J268 109 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 SERTM2A0A1B0GWG4 89 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 UMAD1C9J7I0 102 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 INAFM2P0DMQ5 153 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 TIRAPP58753 221 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 TMEM183BQ1AE95 376 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 MUC21Q5SSG8 566 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 TMEM183AQ8IXX5 376 aa10.16□□□□□ -0.78
VAPA-209ENST00000585042 M0R2P5 195 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 SFTA3P0C7M3 94 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 TPT1P13693 172 aaKnown RBP10.15□□□□□ -0.78
VAPA-209ENST00000585042 EIF5AL1Q6IS14 154 aaKnown RBP10.15□□□□□ -0.78
VAPA-209ENST00000585042 TMUB2Q71RG4 321 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 AKAP14Q86UN6 197 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 WFDC10BQ8IUB3 73 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 C5orf17Q8NAS9 161 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 SUN5Q8TC36 379 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 FRZBQ92765 325 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 NKX6-2Q9C056 277 aaPredicted RBP10.15□□□□□ -0.78
VAPA-209ENST00000585042 RPH3ALQ9UNE2 315 aa10.15□□□□□ -0.78
VAPA-209ENST00000585042 A0A1W2PRE2 83 aa10.14□□□□□ -0.79
VAPA-209ENST00000585042 CIDEAO60543 219 aa10.14□□□□□ -0.79
VAPA-209ENST00000585042 GCSHP23434 173 aa10.14□□□□□ -0.79
VAPA-209ENST00000585042 OR4C5Q8NGB2 326 aa10.14□□□□□ -0.79
VAPA-209ENST00000585042 hCG_2014768A0A024R1R8 64 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 TRAV21A0A0B4J279 112 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 MAP1LC3B2A6NCE7 125 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 C1QBP02746 253 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 CRYGDP07320 174 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
VAPA-209ENST00000585042 DPPA3Q6W0C5 159 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 GOLT1AQ6ZVE7 132 aa10.13□□□□□ -0.79
VAPA-209ENST00000585042 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms