RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SMIM7Q9BQ49 75 aa12.4□□□□□ -0.42
TOP3A-220ENST00000585031 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.42
TOP3A-220ENST00000585031 FAT3Q8TDW7 4589 aa12.4□□□□□ -0.42
TOP3A-220ENST00000585031 TRAV5A0A0B4J249 113 aa12.39□□□□□ -0.43
TOP3A-220ENST00000585031 KRTAP29-1A8MX34 341 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-220ENST00000585031 INSP01308 110 aa12.39□□□□□ -0.43
TOP3A-220ENST00000585031 BTN1A1Q13410 526 aa12.39□□□□□ -0.43
TOP3A-220ENST00000585031 OR5I1Q13606 314 aa12.39□□□□□ -0.43
TOP3A-220ENST00000585031 C1orf194Q5T5A4 169 aa12.39□□□□□ -0.43
TOP3A-220ENST00000585031 RPUSD4Q96CM3 377 aaKnown RBP12.39□□□□□ -0.43
TOP3A-220ENST00000585031 SLC25A39Q9BZJ4 359 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-220ENST00000585031 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
TOP3A-220ENST00000585031 B4DEV8 164 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 OR10J4P0C629 311 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-220ENST00000585031 ZNF674Q2M3X9 581 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 MORN5Q5VZ52 161 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 Q6ZSN1 163 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 SHANK2-AS3Q9BTD1 123 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 PARLQ9H300 379 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 NOP10Q9NPE3 64 aaKnown RBP12.38□□□□□ -0.43
TOP3A-220ENST00000585031 TMEM14CQ9P0S9 112 aa12.38□□□□□ -0.43
TOP3A-220ENST00000585031 TRAV8-2A0A0B4J237 113 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 H3BRN7 92 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 TMEM241Q24JQ0 296 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 OR8I2Q8N0Y5 310 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 C11orf52Q96A22 123 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 RPS10P5Q9NQ39 176 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 SMCO4Q9NRQ5 59 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 PRELID1Q9Y255 219 aa12.37□□□□□ -0.43
TOP3A-220ENST00000585031 C7orf77A4D0Y5 90 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 PYYP10082 97 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 HTN1P15515 57 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 BPIFA4PQ86YQ2 179 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 RNF182Q8N6D2 247 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 FXYD5Q96DB9 178 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 LINC01587Q99440 93 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 SDF2L1Q9HCN8 221 aa12.36□□□□□ -0.43
TOP3A-220ENST00000585031 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
TOP3A-220ENST00000585031 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
TOP3A-220ENST00000585031 TIMM8BQ9Y5J9 83 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-220ENST00000585031 A0A087WWC5 75 aa12.34□□□□□ -0.43
TOP3A-220ENST00000585031 SCO2A0A1W2PP80 73 aa12.34□□□□□ -0.43
TOP3A-220ENST00000585031 EREGO14944 169 aa12.34□□□□□ -0.43
TOP3A-220ENST00000585031 NDUFB4O95168 129 aa12.34□□□□□ -0.43
TOP3A-220ENST00000585031 NBEAP1P0C6P0 100 aa12.34□□□□□ -0.43
TOP3A-220ENST00000585031 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-220ENST00000585031 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
TOP3A-220ENST00000585031 A0A087WTM6 91 aa12.33□□□□□ -0.44
TOP3A-220ENST00000585031 ZNF98A6NK75 572 aa12.33□□□□□ -0.44
TOP3A-220ENST00000585031 TAS2R60P59551 318 aa12.33□□□□□ -0.44
TOP3A-220ENST00000585031 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
TOP3A-220ENST00000585031 SUMO1P63165 101 aaKnown RBP12.33□□□□□ -0.44
TOP3A-220ENST00000585031 GGTLC3B5MD39 225 aa12.32□□□□□ -0.44
TOP3A-220ENST00000585031 DUSP14O95147 198 aaKnown RBP12.32□□□□□ -0.44
TOP3A-220ENST00000585031 RPL7P18124 248 aaKnown RBP12.32□□□□□ -0.44
TOP3A-220ENST00000585031 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
TOP3A-220ENST00000585031 ADIRFQ15847 76 aa12.32□□□□□ -0.44
TOP3A-220ENST00000585031 BLNKQ8WV28 456 aa12.32□□□□□ -0.44
TOP3A-220ENST00000585031 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
TOP3A-220ENST00000585031 A0A096LPF7 62 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 MT-ND4LP03901 98 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 MEOX2P50222 304 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 CBLN2Q8IUK8 224 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 SYT8Q8NBV8 401 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 GPR82Q96P67 336 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 CTDSP1Q9GZU7 261 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
TOP3A-220ENST00000585031 C9JCJ5 164 aa12.3□□□□□ -0.44
TOP3A-220ENST00000585031 AKR1C3P42330 323 aa12.3□□□□□ -0.44
TOP3A-220ENST00000585031 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
TOP3A-220ENST00000585031 OTORQ9NRC9 128 aa12.3□□□□□ -0.44
TOP3A-220ENST00000585031 GAGE12BA1L429 117 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 PGPA6NDG6 321 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 H3BNG1 76 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 PEX7O00628 323 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 GAGE7O76087 117 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 SLC25A5P05141 298 aaKnown RBP12.29□□□□□ -0.44
TOP3A-220ENST00000585031 GAGE12FP0CL80 117 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 GAGE12GP0CL81 117 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 GAGE12IP0CL82 117 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 GCSHP23434 173 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 GALR1P47211 349 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 RANP62826 216 aaKnown RBP12.29□□□□□ -0.44
TOP3A-220ENST00000585031 PDE6HQ13956 83 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 SAMD13Q5VXD3 122 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 C15orf54Q8N8G6 183 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 C5orf17Q8NAS9 161 aa12.29□□□□□ -0.44
TOP3A-220ENST00000585031 SIVA1O15304 175 aa12.28□□□□□ -0.44
TOP3A-220ENST00000585031 S100A9P06702 114 aaKnown RBP12.28□□□□□ -0.44
TOP3A-220ENST00000585031 RPL35P42766 123 aaKnown RBP12.28□□□□□ -0.44
TOP3A-220ENST00000585031 ZNF493Q6ZR52 646 aa12.28□□□□□ -0.44
TOP3A-220ENST00000585031 OR10J6PQ8NGY7 276 aa12.28□□□□□ -0.44
TOP3A-220ENST00000585031 CMTM2Q8TAZ6 248 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms