RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 LINC00467Q9BRT7 94 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 GGACTQ9BVM4 153 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 SRRQ9GZT4 340 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 AGPAT4-IT1Q9H0P7 198 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 PRO0255Q9UI72 69 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 LY96Q9Y6Y9 160 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 IGKV2-40A0A087WW87 121 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 UBE2L5PA0A1B0GUS4 154 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 MPDU1O75352 247 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 CST7O76096 145 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 IGKV2D-40P01614 121 aaPredicted RBP5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 GPX1P07203 203 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 PYYP10082 97 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 CRISP2P16562 243 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 S100A5P33763 92 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 BTCP35070 178 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 INPP1P49441 399 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 BCAP31P51572 246 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 FHL2Q14192 279 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 MRPL23Q16540 153 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 IBA57Q5T440 356 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 NEGR1Q7Z3B1 354 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 EXOC3-AS1Q8N2X6 119 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 NEXN-AS1Q8NBZ9 246 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 OR1L4Q8NGR5 311 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 PFDN5Q99471 154 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 VGLL1Q99990 258 aa5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 CHTOPQ9Y3Y2 248 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 LSM5Q9Y4Y9 91 aaKnown RBP5.26□□□□□ -1.57
SMCHD1-210ENST00000583800 IGHV1OR15-1A0A075B7D0 117 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 hDV102S1A0JD36 115 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 NAP1L6A6NFF2 107 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 FAM24AA6NFZ4 105 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 E5RGE8 158 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 K7EQD1 137 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 SFTA3P0C7M3 94 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 SRIP30626 198 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 CAV2P51636 162 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 BAXQ07812 192 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 RAB31Q13636 194 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 TRIQKQ629K1 86 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 FAM122CQ6P4D5 195 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 ZFAND2AQ8N6M9 145 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 BLNKQ8WV28 456 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 MITD1Q8WV92 249 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 LINC00477Q96M19 166 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 SLC39A9Q9NUM3 307 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 UQCC1Q9NVA1 299 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 HHLA3Q9XRX5 114 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 TIMM9Q9Y5J7 89 aa5.25□□□□□ -1.57
SMCHD1-210ENST00000583800 TRAV9-2A0A087WT02 112 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 TRGV4A0A0C4DH28 118 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 CCDC160A6NGH7 325 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 HIST1H1EP10412 219 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 RPL29P47914 159 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 SLAQ13239 276 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 PDE6HQ13956 83 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 GCSAMLQ5JQS6 135 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 MUC21Q5SSG8 566 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 TMEM78Q5T7P6 136 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 C9orf47Q6ZRZ4 202 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 Q8TAT8 98 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 ZNF479Q96JC4 524 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 C11orf1Q9H5F2 150 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 TMEM14CQ9P0S9 112 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 PRELID1Q9Y255 219 aa5.24□□□□□ -1.57
SMCHD1-210ENST00000583800 SRRM2Q9UQ35 2752 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 IGLV5-52A0A0A0MRZ9 124 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 SERTM2A0A1B0GWG4 89 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 IGSF23A1L1A6 192 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 CRYGDP07320 174 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 FGF7P21781 194 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 EVI2AP22794 236 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 GAGE1Q13065 139 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 GAGE4Q13068 117 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 ZNF846Q147U1 533 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 SPANXN2Q5MJ10 180 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 C12orf45Q8N5I9 185 aaPredicted RBP5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 PCNPQ8WW12 178 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 SDHCQ99643 169 aaPredicted RBP5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 SLC25A2Q9BXI2 301 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 MRPL32Q9BYC8 188 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 C20orf85Q9H1P6 137 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 ZNF492Q9P255 531 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
SMCHD1-210ENST00000583800 LOC100131303A0A0U1RQF7 123 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 LRCOL1A6NCL2 159 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 RNF222A6NCQ9 220 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 CENPXA8MT69 81 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 PSCAO43653 123 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 NMBP08949 121 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 SULT1A1P50225 295 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 PPT1P50897 306 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 S100A10P60903 97 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 MIR17HGQ75NE6 70 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 COX8CQ7Z4L0 72 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 TMEM252Q8N6L7 170 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 OR10G4Q8NGN3 311 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 PHYHIPLQ96FC7 376 aa5.22□□□□□ -1.57
SMCHD1-210ENST00000583800 URB1-AS1Q96HZ7 61 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms