RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 MED14OSP0DP75 135 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 CRIP1P50238 77 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 ZNF80P51504 273 aaPredicted RBP6.7□□□□□ -1.34
UBBP4-201ENST00000583708 TCL1AP56279 114 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 ZNF415Q09FC8 603 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 LINC01559Q495D7 138 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 PRR9Q5T870 116 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 FAM231DQ6ZW35 169 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 C18orf15Q96N68 181 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 WWC2-AS2Q96NR7 200 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 B4DEV8 164 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 KRBOX1C9JBD0 128 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 SH2D1AO60880 128 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 IGLV2-8P01709 118 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 ORM1P02763 201 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 PNRC1Q12796 327 aaPredicted RBP6.69□□□□□ -1.34
UBBP4-201ENST00000583708 OCC1Q8TAD7 63 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 PCNPQ8WW12 178 aaKnown RBP6.69□□□□□ -1.34
UBBP4-201ENST00000583708 DERL1Q9BUN8 251 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 RETNQ9HD89 108 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 DKK2Q9UBU2 259 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 NAT8Q9UHE5 227 aa6.69□□□□□ -1.34
UBBP4-201ENST00000583708 TRBV20OR9-2A0A075B6H5 130 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 IGHV3-16A0A0C4DH30 117 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 A0A1W2PPQ1 181 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 C19orf71A6NCJ1 209 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 FAM231BA6NCW3 169 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 P01737 135 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 PRB4P10163 310 aaPredicted RBP6.68□□□□□ -1.34
UBBP4-201ENST00000583708 MGST1P10620 155 aaKnown RBP6.68□□□□□ -1.34
UBBP4-201ENST00000583708 HTN1P15515 57 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 AZU1P20160 251 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 ASIPP42127 132 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 CT83Q5H943 113 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 WDR73Q6P4I2 378 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 C11orf72Q8NBR9 251 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 RASL10AQ92737 203 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 FAM210BQ96KR6 192 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 OSTCQ9NRP0 149 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 IL36BQ9NZH7 164 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 TENM3Q9P273 2699 aa6.68□□□□□ -1.34
UBBP4-201ENST00000583708 IGKV3D-20A0A0C4DH25 116 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 PLAC8L1A1L4L8 177 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 F2Z2F3 143 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 M0R2P5 195 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 SPINK4O60575 86 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 S100A4P26447 101 aaKnown RBP6.67□□□□□ -1.34
UBBP4-201ENST00000583708 CEBPGP53567 150 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 TCTAP57738 103 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 SLAQ13239 276 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 NDUFA5Q16718 116 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 MUC21Q5SSG8 566 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 LINC01551Q86U37 167 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 LINC00612Q8N6U2 182 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 C15orf54Q8N8G6 183 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 C11orf21Q9P2W6 132 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 NAGKQ9UJ70 344 aa6.67□□□□□ -1.34
UBBP4-201ENST00000583708 TMEM218A2RU14 115 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 A8MWL6 223 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 C9JQL5 133 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 C3orf84H3BNL1 204 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 TYMSP04818 313 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 OR5AL1P0C617 328 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 DAD1P61803 113 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
UBBP4-201ENST00000583708 OR5I1Q13606 314 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 FAM222AQ5U5X8 452 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 NHLRC2Q8NBF2 726 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 SYT8Q8NBV8 401 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 SSBP4Q9BWG4 385 aaPredicted RBP6.66□□□□□ -1.34
UBBP4-201ENST00000583708 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
UBBP4-201ENST00000583708 GSN-AS1Q9NRJ2 163 aa6.66□□□□□ -1.34
UBBP4-201ENST00000583708 PPP1R2P9O14990 202 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 GNRH2O43555 120 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 SFTA3P0C7M3 94 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 EMP1P54849 157 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 FOXA3P55318 350 aaPredicted RBP6.65□□□□□ -1.34
UBBP4-201ENST00000583708 ERVFC1-1P60608 527 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 PRR27Q6MZM9 219 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 COMMD7Q86VX2 200 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 OR2D3Q8NGH3 330 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 SEC11CQ9BY50 192 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 GFRA4Q9GZZ7 299 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 RPP21Q9H633 154 aaKnown RBP6.65□□□□□ -1.34
UBBP4-201ENST00000583708 SCRT2Q9NQ03 307 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 MDFICQ9P1T7 246 aa6.65□□□□□ -1.34
UBBP4-201ENST00000583708 TRAV10A0A0B4J240 114 aa6.64□□□□□ -1.35
UBBP4-201ENST00000583708 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
UBBP4-201ENST00000583708 A8MWV9 139 aa6.64□□□□□ -1.35
UBBP4-201ENST00000583708 K7EN84 100 aa6.64□□□□□ -1.35
UBBP4-201ENST00000583708 SNAI2O43623 268 aa6.64□□□□□ -1.35
UBBP4-201ENST00000583708 GATCO43716 136 aaKnown RBP6.64□□□□□ -1.35
UBBP4-201ENST00000583708 ATP5G1P05496 136 aa6.64□□□□□ -1.35
UBBP4-201ENST00000583708 RNASE3P12724 160 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms