RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 C5orf56Q8N8D9 126 aa10.46□□□□□ -0.73
GGA3-214ENST00000582717 NHP2Q9NX24 153 aaKnown RBP10.46□□□□□ -0.73
GGA3-214ENST00000582717 ZFHX3Q15911 3703 aa10.46□□□□□ -0.74
GGA3-214ENST00000582717 G3V318 75 aa10.46□□□□□ -0.74
GGA3-214ENST00000582717 K7ERJ3 54 aa10.46□□□□□ -0.74
GGA3-214ENST00000582717 CTSGP08311 255 aa10.46□□□□□ -0.74
GGA3-214ENST00000582717 CRYBG3Q68DQ2 2970 aa10.46□□□□□ -0.74
GGA3-214ENST00000582717 IGHV4-38-2P0DP08 117 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 MYOZ3Q8TDC0 251 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 ZNF462Q96JM2 2506 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 IGLL5B9A064 214 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 ZNF207O43670 478 aaKnown RBP10.45□□□□□ -0.74
GGA3-214ENST00000582717 GAS8-AS1O95177 125 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 PLNP26678 52 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 TTTY13Q9BZ97 58 aa10.45□□□□□ -0.74
GGA3-214ENST00000582717 CELSR2Q9HCU4 2923 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 HLA-DMBP28068 263 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 LAGE3Q14657 143 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 C15orf32Q32M92 178 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 IL17RELQ6ZVW7 336 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 SLC50A1Q9BRV3 221 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 LINC01619G3V211 115 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 ZNF502Q8TBZ5 544 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 ZNF479Q96JC4 524 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 SIGMAR1Q99720 223 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
GGA3-214ENST00000582717 A0A087WX48 190 aa10.43□□□□□ -0.74
GGA3-214ENST00000582717 IGHV3-35A0A0C4DH35 117 aa10.43□□□□□ -0.74
GGA3-214ENST00000582717 GATA1P15976 413 aaPredicted RBP10.43□□□□□ -0.74
GGA3-214ENST00000582717 ZNF843Q8N446 348 aa10.43□□□□□ -0.74
GGA3-214ENST00000582717 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
GGA3-214ENST00000582717 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
GGA3-214ENST00000582717 MOB4Q9Y3A3 225 aa10.43□□□□□ -0.74
GGA3-214ENST00000582717 IGHV3OR16-8A0A075B7F1 116 aa10.42□□□□□ -0.74
GGA3-214ENST00000582717 MSMBP08118 114 aa10.42□□□□□ -0.74
GGA3-214ENST00000582717 ERCC8Q13216 396 aa10.42□□□□□ -0.74
GGA3-214ENST00000582717 CD300EQ496F6 205 aaPredicted RBP10.42□□□□□ -0.74
GGA3-214ENST00000582717 IGFL4Q6B9Z1 124 aa10.42□□□□□ -0.74
GGA3-214ENST00000582717 C12orf74Q32Q52 190 aa10.42□□□□□ -0.74
GGA3-214ENST00000582717 NRACQ8N912 160 aa10.42□□□□□ -0.74
GGA3-214ENST00000582717 MAP1AP78559 2803 aaPredicted RBP10.41□□□□□ -0.74
GGA3-214ENST00000582717 IGHV4-4A0A075B6R2 117 aa10.41□□□□□ -0.74
GGA3-214ENST00000582717 CCDC140Q96MF4 163 aa10.41□□□□□ -0.74
GGA3-214ENST00000582717 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
GGA3-214ENST00000582717 IGKV3D-20A0A0C4DH25 116 aa10.41□□□□□ -0.74
GGA3-214ENST00000582717 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
GGA3-214ENST00000582717 HIF1ANQ9NWT6 349 aa10.41□□□□□ -0.74
GGA3-214ENST00000582717 FBN2P35556 2912 aa10.4□□□□□ -0.74
GGA3-214ENST00000582717 PRAC2D3DTV9 90 aa10.4□□□□□ -0.74
GGA3-214ENST00000582717 CLEC3BP05452 202 aa10.4□□□□□ -0.74
GGA3-214ENST00000582717 AZU1P20160 251 aa10.4□□□□□ -0.74
GGA3-214ENST00000582717 PPIFP30405 207 aaKnown RBP10.4□□□□□ -0.74
GGA3-214ENST00000582717 MAPKAPK5-AS1Q8N8E1 139 aa10.4□□□□□ -0.74
GGA3-214ENST00000582717 MRAP2Q96G30 205 aa10.4□□□□□ -0.74
GGA3-214ENST00000582717 LINC00527Q9UJ94 153 aa10.4□□□□□ -0.74
GGA3-214ENST00000582717 UBR5O95071 2799 aaPredicted RBP10.4□□□□□ -0.74
GGA3-214ENST00000582717 A0A1B0GWB2 263 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 GAGE12HA6NDE8 117 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 BUB3O43684 328 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 AVPP01185 164 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 TRGV3P03979 118 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 LY6EQ16553 131 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 RRN3P1Q2M238 152 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 C19orf54Q5BKX5 351 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 HIST1H4GQ99525 98 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.75
GGA3-214ENST00000582717 F8VRH5 84 aa10.39□□□□□ -0.75
GGA3-214ENST00000582717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.39□□□□□ -0.75
GGA3-214ENST00000582717 H7C1H1 209 aa10.39□□□□□ -0.75
GGA3-214ENST00000582717 WFDC2Q14508 124 aa10.39□□□□□ -0.75
GGA3-214ENST00000582717 CLEC19AQ6UXS0 136 aa10.39□□□□□ -0.75
GGA3-214ENST00000582717 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
GGA3-214ENST00000582717 FAM208BQ5VWN6 2430 aa10.39□□□□□ -0.75
GGA3-214ENST00000582717 CSMD2Q7Z408 3487 aa10.39□□□□□ -0.75
GGA3-214ENST00000582717 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 TRAV41A0A0B4J266 112 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 IGHV7-4-1A0A0J9YVY3 117 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 TMEM78Q5T7P6 136 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 TSSC4Q9Y5U2 329 aaPredicted RBP10.38□□□□□ -0.75
GGA3-214ENST00000582717 H3BUX3 64 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 COX6B1P14854 86 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 SLC25A16P16260 332 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 C11orf21Q9P2W6 132 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 LRRK2Q5S007 2527 aa10.38□□□□□ -0.75
GGA3-214ENST00000582717 B4DSR2 109 aa10.37□□□□□ -0.75
GGA3-214ENST00000582717 CRIP2P52943 208 aaPredicted RBP10.37□□□□□ -0.75
GGA3-214ENST00000582717 DSCR9P59020 149 aa10.37□□□□□ -0.75
GGA3-214ENST00000582717 RNF182Q8N6D2 247 aa10.37□□□□□ -0.75
GGA3-214ENST00000582717 EEF1AKMT3Q96AZ1 226 aa10.37□□□□□ -0.75
GGA3-214ENST00000582717 SMIM2Q9BVW6 85 aa10.37□□□□□ -0.75
GGA3-214ENST00000582717 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.37□□□□□ -0.755e-7■■■■□ 20.8
GGA3-214ENST00000582717 MYMXA0A1B0GTQ4 84 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms