RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 RASL10AQ92737 203 aa12.96□□□□□ -0.33
LIMS2-218ENST00000582671 LINC00479Q96M42 142 aa12.96□□□□□ -0.33
LIMS2-218ENST00000582671 SPXQ9BT56 116 aa12.96□□□□□ -0.33
LIMS2-218ENST00000582671 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
LIMS2-218ENST00000582671 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
LIMS2-218ENST00000582671 NBDYA0A0U1RRE5 68 aa12.95□□□□□ -0.34
LIMS2-218ENST00000582671 FAM74A7A6NL05 159 aa12.95□□□□□ -0.34
LIMS2-218ENST00000582671 FHITP49789 147 aa12.95□□□□□ -0.34
LIMS2-218ENST00000582671 TRAV34A0A0B4J273 112 aa12.94□□□□□ -0.34
LIMS2-218ENST00000582671 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
LIMS2-218ENST00000582671 GCGP01275 180 aa12.94□□□□□ -0.34
LIMS2-218ENST00000582671 SFTA3P0C7M3 94 aa12.94□□□□□ -0.34
LIMS2-218ENST00000582671 CRYBA4P53673 196 aa12.94□□□□□ -0.34
LIMS2-218ENST00000582671 ZNF479Q96JC4 524 aa12.94□□□□□ -0.34
LIMS2-218ENST00000582671 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
LIMS2-218ENST00000582671 PAX4O43316 350 aa12.93□□□□□ -0.34
LIMS2-218ENST00000582671 KCNS1Q96KK3 526 aa12.93□□□□□ -0.34
LIMS2-218ENST00000582671 Q9H8V8 135 aa12.93□□□□□ -0.34
LIMS2-218ENST00000582671 SDF2L1Q9HCN8 221 aa12.93□□□□□ -0.34
LIMS2-218ENST00000582671 PRO0255Q9UI72 69 aa12.93□□□□□ -0.34
LIMS2-218ENST00000582671 HHLA3Q9XRX5 114 aa12.93□□□□□ -0.34
LIMS2-218ENST00000582671 A0A0D9SG52 128 aa12.92□□□□□ -0.34
LIMS2-218ENST00000582671 BCL2L11O43521 198 aa12.92□□□□□ -0.34
LIMS2-218ENST00000582671 IFNA7P01567 189 aa12.92□□□□□ -0.34
LIMS2-218ENST00000582671 C1orf134Q5TEV5 83 aa12.92□□□□□ -0.34
LIMS2-218ENST00000582671 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
LIMS2-218ENST00000582671 MRPS16Q9Y3D3 137 aaKnown RBP12.92□□□□□ -0.34
LIMS2-218ENST00000582671 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
LIMS2-218ENST00000582671 M0R2P5 195 aa12.91□□□□□ -0.34
LIMS2-218ENST00000582671 PEX7O00628 323 aa12.91□□□□□ -0.34
LIMS2-218ENST00000582671 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
LIMS2-218ENST00000582671 SEC11BP0C7V7 166 aa12.91□□□□□ -0.34
LIMS2-218ENST00000582671 SMUG1Q53HV7 270 aa12.91□□□□□ -0.34
LIMS2-218ENST00000582671 SAPCD1Q5SSQ6 148 aa12.91□□□□□ -0.34
LIMS2-218ENST00000582671 ZNF471Q9BX82 626 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-218ENST00000582671 ARL2-SNX15V9GYD0 113 aa12.91□□□□□ -0.34
LIMS2-218ENST00000582671 TRGV4A0A0C4DH28 118 aa12.9□□□□□ -0.34
LIMS2-218ENST00000582671 KRTAP1-5Q9BYS1 174 aa12.9□□□□□ -0.34
LIMS2-218ENST00000582671 ICOSQ9Y6W8 199 aa12.9□□□□□ -0.34
LIMS2-218ENST00000582671 KANTRA0A1W2PQU2 76 aa12.89□□□□□ -0.35
LIMS2-218ENST00000582671 SLAQ13239 276 aa12.89□□□□□ -0.35
LIMS2-218ENST00000582671 ZFP69Q49AA0 526 aa12.89□□□□□ -0.35
LIMS2-218ENST00000582671 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
LIMS2-218ENST00000582671 Q86TA4 180 aa12.89□□□□□ -0.35
LIMS2-218ENST00000582671 HIST1H2BAQ96A08 127 aa12.89□□□□□ -0.35
LIMS2-218ENST00000582671 NKX6-2Q9C056 277 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-218ENST00000582671 HECTD4Q9Y4D8 3996 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 TRAV4A0A0B4J268 109 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 TMUB2Q71RG4 321 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 STOML3Q8TAV4 291 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 FAM213BQ8TBF2 198 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 MBD3L1Q8WWY6 194 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
LIMS2-218ENST00000582671 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
LIMS2-218ENST00000582671 PPT1P50897 306 aa12.87□□□□□ -0.35
LIMS2-218ENST00000582671 C6orf223Q8N319 242 aa12.87□□□□□ -0.35
LIMS2-218ENST00000582671 PKD1P98161 4303 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 A0A1B0GV50 99 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 UMAD1C9J7I0 102 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 C9JCJ5 164 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 K7EQD1 137 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 PAGE4O60829 102 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 RNASE3P12724 160 aaKnown RBP12.86□□□□□ -0.35
LIMS2-218ENST00000582671 CRIP1P50238 77 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 CST9LP1Q5W188 147 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 LYPD5Q6UWN5 251 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 SFT2D1Q8WV19 159 aa12.86□□□□□ -0.35
LIMS2-218ENST00000582671 PGPEP1LA6NFU8 196 aa12.85□□□□□ -0.35
LIMS2-218ENST00000582671 PFDN1O60925 122 aa12.85□□□□□ -0.35
LIMS2-218ENST00000582671 TNP2Q05952 138 aa12.85□□□□□ -0.35
LIMS2-218ENST00000582671 MRPL23Q16540 153 aaKnown RBP12.85□□□□□ -0.35
LIMS2-218ENST00000582671 ZNF876PQ49A33 203 aa12.85□□□□□ -0.35
LIMS2-218ENST00000582671 ZC2HC1AQ96GY0 325 aa12.85□□□□□ -0.35
LIMS2-218ENST00000582671 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
LIMS2-218ENST00000582671 GYPEP15421 78 aa12.84□□□□□ -0.35
LIMS2-218ENST00000582671 LGALSLQ3ZCW2 172 aaPredicted RBP12.84□□□□□ -0.35
LIMS2-218ENST00000582671 Q6ZNX1 250 aa12.84□□□□□ -0.35
LIMS2-218ENST00000582671 DYNC1H1Q14204 4646 aaKnown RBP12.83□□□□□ -0.36
LIMS2-218ENST00000582671 LOC100131303A0A0U1RQF7 123 aa12.83□□□□□ -0.36
LIMS2-218ENST00000582671 RS1O15537 224 aa12.83□□□□□ -0.36
LIMS2-218ENST00000582671 TPT1P13693 172 aaKnown RBP12.83□□□□□ -0.36
LIMS2-218ENST00000582671 EIF5AP63241 154 aaKnown RBP12.83□□□□□ -0.36
LIMS2-218ENST00000582671 NEGR1Q7Z3B1 354 aa12.83□□□□□ -0.36
LIMS2-218ENST00000582671 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
LIMS2-218ENST00000582671 TCTE3Q8IZS6 198 aa12.83□□□□□ -0.36
LIMS2-218ENST00000582671 FMC1Q96HJ9 113 aa12.83□□□□□ -0.36
LIMS2-218ENST00000582671 KIAA1109Q2LD37 5005 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 TRBV6-1A0A0K0K1D8 114 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 NXPH4O95158 308 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 GATA1P15976 413 aaPredicted RBP12.82□□□□□ -0.36
LIMS2-218ENST00000582671 SRIP30626 198 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 TTC32Q5I0X7 151 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 ZNF506Q5JVG8 444 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 CFAP126Q5VTH2 177 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 PTH2Q96A98 100 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 TCEAL7Q9BRU2 100 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 ZFP30Q9Y2G7 519 aa12.82□□□□□ -0.36
LIMS2-218ENST00000582671 A0A1W2PPQ1 181 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms