RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 NOP10Q9NPE3 64 aaKnown RBP14.32□□□□□ -0.12
TOP3A-213ENST00000582230 GSN-AS1Q9NRJ2 163 aa14.32□□□□□ -0.12
TOP3A-213ENST00000582230 CRIP1P50238 77 aa14.31□□□□□ -0.12
TOP3A-213ENST00000582230 TCL1AP56279 114 aa14.31□□□□□ -0.12
TOP3A-213ENST00000582230 IFITM2Q01629 132 aa14.31□□□□□ -0.12
TOP3A-213ENST00000582230 ZNF415Q09FC8 603 aa14.31□□□□□ -0.12
TOP3A-213ENST00000582230 C12orf74Q32Q52 190 aa14.31□□□□□ -0.12
TOP3A-213ENST00000582230 NHLRC2Q8NBF2 726 aa14.31□□□□□ -0.12
TOP3A-213ENST00000582230 RAB19A4D1S5 217 aa14.3□□□□□ -0.12
TOP3A-213ENST00000582230 SH2D1AO60880 128 aa14.3□□□□□ -0.12
TOP3A-213ENST00000582230 SMDT1Q9H4I9 107 aa14.3□□□□□ -0.12
TOP3A-213ENST00000582230 C11orf21Q9P2W6 132 aa14.3□□□□□ -0.12
TOP3A-213ENST00000582230 GNRH2O43555 120 aa14.29□□□□□ -0.12
TOP3A-213ENST00000582230 DAD1P61803 113 aa14.29□□□□□ -0.12
TOP3A-213ENST00000582230 PEA15Q15121 130 aa14.29□□□□□ -0.12
TOP3A-213ENST00000582230 PARLQ9H300 379 aa14.29□□□□□ -0.12
TOP3A-213ENST00000582230 C9JCJ5 164 aa14.28□□□□□ -0.12
TOP3A-213ENST00000582230 ORM1P02763 201 aa14.28□□□□□ -0.12
TOP3A-213ENST00000582230 TYMSP04818 313 aa14.28□□□□□ -0.12
TOP3A-213ENST00000582230 CLLU1Q5K131 121 aa14.28□□□□□ -0.12
TOP3A-213ENST00000582230 SPXQ9BT56 116 aa14.28□□□□□ -0.12
TOP3A-213ENST00000582230 BIN3Q9NQY0 253 aa14.28□□□□□ -0.12
TOP3A-213ENST00000582230 MDFICQ9P1T7 246 aa14.28□□□□□ -0.12
TOP3A-213ENST00000582230 TRBV20OR9-2A0A075B6H5 130 aa14.27□□□□□ -0.13
TOP3A-213ENST00000582230 IGKV3D-20A0A0C4DH25 116 aa14.27□□□□□ -0.13
TOP3A-213ENST00000582230 IGHV3-16A0A0C4DH30 117 aa14.27□□□□□ -0.13
TOP3A-213ENST00000582230 IGLV2-8P01709 118 aa14.27□□□□□ -0.13
TOP3A-213ENST00000582230 SRP19P09132 144 aaKnown RBP14.27□□□□□ -0.13
TOP3A-213ENST00000582230 DEFB130BP0DP73 79 aa14.27□□□□□ -0.13
TOP3A-213ENST00000582230 DEFB130AP0DP74 79 aa14.27□□□□□ -0.13
TOP3A-213ENST00000582230 Q6ZTC4 211 aa14.27□□□□□ -0.13
TOP3A-213ENST00000582230 PHLDA1Q8WV24 401 aaPredicted RBP14.27□□□□□ -0.13
TOP3A-213ENST00000582230 TRAV10A0A0B4J240 114 aa14.26□□□□□ -0.13
TOP3A-213ENST00000582230 NUPR2A6NF83 97 aa14.26□□□□□ -0.13
TOP3A-213ENST00000582230 B4DEV8 164 aa14.26□□□□□ -0.13
TOP3A-213ENST00000582230 MGST1P10620 155 aaKnown RBP14.26□□□□□ -0.13
TOP3A-213ENST00000582230 CEBPGP53567 150 aa14.26□□□□□ -0.13
TOP3A-213ENST00000582230 LGALS9BQ3B8N2 356 aa14.26□□□□□ -0.13
TOP3A-213ENST00000582230 ZFAND6Q6FIF0 208 aa14.26□□□□□ -0.13
TOP3A-213ENST00000582230 LINC00612Q8N6U2 182 aa14.26□□□□□ -0.13
TOP3A-213ENST00000582230 KRBOX1C9JBD0 128 aa14.25□□□□□ -0.13
TOP3A-213ENST00000582230 SPINK4O60575 86 aa14.25□□□□□ -0.13
TOP3A-213ENST00000582230 LINC01559Q495D7 138 aa14.25□□□□□ -0.13
TOP3A-213ENST00000582230 CASC10Q5T4H9 136 aa14.25□□□□□ -0.13
TOP3A-213ENST00000582230 PRR27Q6MZM9 219 aa14.25□□□□□ -0.13
TOP3A-213ENST00000582230 CEMP1Q6PRD7 247 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-213ENST00000582230 M0R036 132 aa14.24□□□□□ -0.13
TOP3A-213ENST00000582230 DAZAP1Q96EP5 407 aaKnown RBP14.24□□□□□ -0.13
TOP3A-213ENST00000582230 TRGV1A0A0A0MS02 117 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 GAGE12BA1L429 117 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 GAGE7O76087 117 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 GAGE12FP0CL80 117 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 GAGE12GP0CL81 117 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 GAGE12IP0CL82 117 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 ASIPP42127 132 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 DNLZQ5SXM8 178 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 Q6ZTI0 123 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 SMIM7Q9BQ49 75 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 KLK5Q9Y337 293 aaPredicted RBP14.23□□□□□ -0.13
TOP3A-213ENST00000582230 LY96Q9Y6Y9 160 aa14.23□□□□□ -0.13
TOP3A-213ENST00000582230 DEFB131BA0A096LNP1 70 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 PGPEP1LA6NFU8 196 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 ZNF727A8MUV8 499 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 M0R2P5 195 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 S100A4P26447 101 aaKnown RBP14.22□□□□□ -0.13
TOP3A-213ENST00000582230 SRSF3P84103 164 aaKnown RBP14.22□□□□□ -0.13
TOP3A-213ENST00000582230 OR5I1Q13606 314 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 FAM74A3Q4VXF1 159 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 OCC1Q8TAD7 63 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 C18orf15Q96N68 181 aa14.22□□□□□ -0.13
TOP3A-213ENST00000582230 TRGV2A0A075B6R0 118 aa14.21□□□□□ -0.13
TOP3A-213ENST00000582230 C9JQL5 133 aa14.21□□□□□ -0.13
TOP3A-213ENST00000582230 ATP5G1P05496 136 aa14.21□□□□□ -0.13
TOP3A-213ENST00000582230 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
TOP3A-213ENST00000582230 RASL10AQ92737 203 aa14.21□□□□□ -0.13
TOP3A-213ENST00000582230 C9orf85Q96MD7 179 aa14.21□□□□□ -0.13
TOP3A-213ENST00000582230 C19orf71A6NCJ1 209 aa14.2□□□□□ -0.14
TOP3A-213ENST00000582230 MRPL16Q9NX20 251 aaKnown RBP14.2□□□□□ -0.14
TOP3A-213ENST00000582230 IL36BQ9NZH7 164 aa14.2□□□□□ -0.14
TOP3A-213ENST00000582230 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
TOP3A-213ENST00000582230 CXCL1P09341 107 aa14.19□□□□□ -0.14
TOP3A-213ENST00000582230 PTH2Q96A98 100 aa14.19□□□□□ -0.14
TOP3A-213ENST00000582230 GRIFINA4D1Z8 144 aa14.18□□□□□ -0.14
TOP3A-213ENST00000582230 P01737 135 aa14.18□□□□□ -0.14
TOP3A-213ENST00000582230 HTN3P15516 51 aa14.18□□□□□ -0.14
TOP3A-213ENST00000582230 ZNF575Q86XF7 245 aa14.18□□□□□ -0.14
TOP3A-213ENST00000582230 NDUFAF3Q9BU61 184 aa14.18□□□□□ -0.14
TOP3A-213ENST00000582230 K7EN84 100 aa14.17□□□□□ -0.14
TOP3A-213ENST00000582230 ARMS2P0C7Q2 107 aa14.17□□□□□ -0.14
TOP3A-213ENST00000582230 RPS20P60866 119 aaKnown RBP14.17□□□□□ -0.14
TOP3A-213ENST00000582230 RPL19P84098 196 aaKnown RBP14.17□□□□□ -0.14
TOP3A-213ENST00000582230 ZNF876PQ49A33 203 aa14.17□□□□□ -0.14
TOP3A-213ENST00000582230 SOHLH1Q5JUK2 328 aa14.17□□□□□ -0.14
TOP3A-213ENST00000582230 FAM210BQ96KR6 192 aa14.17□□□□□ -0.14
TOP3A-213ENST00000582230 XKRY2A2RUG3 117 aa14.16□□□□□ -0.14
TOP3A-213ENST00000582230 MED14OSP0DP75 135 aa14.16□□□□□ -0.14
TOP3A-213ENST00000582230 TCTAP57738 103 aa14.16□□□□□ -0.14
TOP3A-213ENST00000582230 TMEM241Q24JQ0 296 aa14.16□□□□□ -0.14
TOP3A-213ENST00000582230 LINC01551Q86U37 167 aa14.16□□□□□ -0.14
TOP3A-213ENST00000582230 NUDT10Q8NFP7 164 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms