RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 HYLS1Q96M11 299 aa7.12□□□□□ -1.27
RFFL-209ENST00000581265 MBD2Q9UBB5 411 aa7.12□□□□□ -1.27
RFFL-209ENST00000581265 BOLA1Q9Y3E2 137 aa7.12□□□□□ -1.27
RFFL-209ENST00000581265 SRRM2Q9UQ35 2752 aaKnown RBP7.12□□□□□ -1.27
RFFL-209ENST00000581265 TRAV21A0A0B4J279 112 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 IBA57-AS1B1ANH7 110 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 GATA1P15976 413 aaPredicted RBP7.11□□□□□ -1.27
RFFL-209ENST00000581265 H2BFSP57053 126 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 LINC01556Q5JQF7 62 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 FAM74A1Q5RGS3 127 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 CMTM2Q8TAZ6 248 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 SCGB1C1Q8TD33 95 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 NTN5Q8WTR8 489 aaPredicted RBP7.11□□□□□ -1.27
RFFL-209ENST00000581265 PPP1R1CQ8WVI7 109 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 TVP23CQ96ET8 276 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 NAGKQ9UJ70 344 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 PLA2G2DQ9UNK4 145 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 HSPB11Q9Y547 144 aa7.11□□□□□ -1.27
RFFL-209ENST00000581265 IGLV5-52A0A0A0MRZ9 124 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 CIDEAO60543 219 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 MPC2O95563 127 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 TYMSP04818 313 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 PFN1P07737 140 aaKnown RBP7.1□□□□□ -1.27
RFFL-209ENST00000581265 PQLC2Q6ZP29 291 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 NHLRC2Q8NBF2 726 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 ENKURQ8TC29 256 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 S100ZQ8WXG8 99 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 TMEM70Q9BUB7 260 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 SDF2L1Q9HCN8 221 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 TREM1Q9NP99 234 aa7.1□□□□□ -1.27
RFFL-209ENST00000581265 TRAV8-6A0A0B4J262 113 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 TRBV6-4A0A1B0GX49 114 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 INMT-MINDY4F8WBC2 141 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 PSCAO43653 123 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 RPL12P30050 165 aaKnown RBP7.09□□□□□ -1.27
RFFL-209ENST00000581265 PPT1P50897 306 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 ZNF876PQ49A33 203 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 SLC25A29Q8N8R3 303 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 ASB13Q8WXK3 278 aa7.09□□□□□ -1.27
RFFL-209ENST00000581265 TRAV8-1A0A0A6YYK1 113 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 A0A1W2PPV4 95 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 FBLL1A6NHQ2 334 aaKnown RBP7.08□□□□□ -1.28
RFFL-209ENST00000581265 RS1O15537 224 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 EIF3GO75821 320 aaKnown RBP eCLIP7.08□□□□□ -1.28
RFFL-209ENST00000581265 UPK1BO75841 260 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 PET100P0DJ07 73 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 ACOT6Q3I5F7 207 aaPredicted RBP7.08□□□□□ -1.28
RFFL-209ENST00000581265 CFAP126Q5VTH2 177 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 Q8N814 137 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 MARVELD1Q9BSK0 173 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 SMIM3Q9BZL3 60 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 WFDC1Q9HC57 220 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 RPH3ALQ9UNE2 315 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 VPS13BQ7Z7G8 4022 aa7.08□□□□□ -1.28
RFFL-209ENST00000581265 F6UZH7 168 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 C1QBP02746 253 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 IFITM3Q01628 133 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 OR10J3Q5JRS4 329 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 LELP1Q5T871 98 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 PTH2Q96A98 100 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 PRADC1Q9BSG0 188 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 C11orf21Q9P2W6 132 aa7.07□□□□□ -1.28
RFFL-209ENST00000581265 MYCBP2O75592 4640 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 SERTM2A0A1B0GWG4 89 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
RFFL-209ENST00000581265 TAAR5O14804 337 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 RAB2AP61019 212 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 GNG5P63218 68 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 HAMPP81172 84 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 LAGE3Q14657 143 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 RHOHQ15669 191 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 DPPA3Q6W0C5 159 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 C9orf85Q96MD7 179 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 NDFIP1Q9BT67 221 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 GTSF1LQ9H1H1 148 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 Q9HAA7 133 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 FAM30AQ9NZY2 134 aa7.06□□□□□ -1.28
RFFL-209ENST00000581265 HMGB3O15347 200 aaKnown RBP7.05□□□□□ -1.28
RFFL-209ENST00000581265 SSNA1O43805 119 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 TCRAP04437 139 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 MGST1P10620 155 aaKnown RBP7.05□□□□□ -1.28
RFFL-209ENST00000581265 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
RFFL-209ENST00000581265 C5orf17Q8NAS9 161 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 OR10G9Q8NGN4 311 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 OR10G7Q8NGN6 311 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 ATP6V0E2Q8NHE4 81 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 SUN5Q8TC36 379 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 SGK494Q96LW2 274 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 TM2D2Q9BX73 214 aa7.05□□□□□ -1.28
RFFL-209ENST00000581265 IGHV3-73A0A0B4J1V6 119 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 PGPEP1LA6NFU8 196 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 K7EQM0 130 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 GCGP01275 180 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 IGLV2-11P01706 119 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 IGHV3-30P01768 117 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 IGHV3-33P01772 117 aa7.04□□□□□ -1.28
RFFL-209ENST00000581265 STAG3L2P0CL84 134 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms