RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 XAF1Q6GPH4 301 aa0.41□□□□□ -2.34
SMCHD1-204ENST00000581226 C10orf99Q6UWK7 81 aa0.41□□□□□ -2.34
SMCHD1-204ENST00000581226 LYPD5Q6UWN5 251 aa0.41□□□□□ -2.34
SMCHD1-204ENST00000581226 C19orf12Q9NSK7 152 aa0.41□□□□□ -2.34
SMCHD1-204ENST00000581226 MYH13Q9UKX3 1938 aa0.4□□□□□ -2.34
SMCHD1-204ENST00000581226 RREB1Q92766 1687 aa0.4□□□□□ -2.34
SMCHD1-204ENST00000581226 CDK5RAP2Q96SN8 1893 aa0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 SPAG17Q6Q759 2223 aa0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 IFITM5A6NNB3 132 aa0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 IGF2P01344 180 aa0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 ASB16-AS1Q495Z4 193 aa0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 C5orf56Q8N8D9 126 aa0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 MRPL36Q9P0J6 103 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 CPDO75976 1380 aa0.4□□□□□ -2.35
SMCHD1-204ENST00000581226 TMEM189A5PLL7 270 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 SULT1C4O75897 302 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 TNFSF15O95150 251 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 CD3DP04234 171 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 ZNF137PP52743 207 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 CAV3P56539 151 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 SNRPD3P62318 126 aaKnown RBP0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 C6orf52Q5T4I8 152 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 C3orf62Q6ZUJ4 267 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 SKA2Q8WVK7 121 aaPredicted RBP0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 MRPL35Q9NZE8 188 aaKnown RBP0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 JPT1Q9UK76 154 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 DNAJC15Q9Y5T4 150 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 TNCP24821 2201 aa0.39□□□□□ -2.35
SMCHD1-204ENST00000581226 TANC1Q9C0D5 1861 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 BBIP1A8MTZ0 92 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 DEGS1O15121 323 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 SCTP09683 121 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 ETV6P41212 452 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 Q6ZS92 163 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 SMR3AQ99954 134 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 HSPB11Q9Y547 144 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 KMT2DO14686 5537 aa0.38□□□□□ -2.35
SMCHD1-204ENST00000581226 ZCCHC6Q5VYS8 1495 aaKnown RBP0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 MYH6P13533 1939 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 ANKRD30AQ9BXX3 1397 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 IGHV1-24A0A0C4DH33 117 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 TMEM30CPA0ZSE6 113 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 C9JAW5 83 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 DPM2O94777 84 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 EVI2AP22794 236 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 CKS2P33552 79 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 HSD17B12Q53GQ0 312 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 TMEM244Q5VVB8 128 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 TMEM91Q6ZNR0 172 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 OR8I2Q8N0Y5 310 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 OR4S1Q8NGB4 309 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 AP1S3Q96PC3 154 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 METTL1Q9UBP6 276 aaKnown RBP0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 HIGD1AQ9Y241 93 aa0.37□□□□□ -2.35
SMCHD1-204ENST00000581226 IL7P13232 177 aa0.36□□□□□ -2.35
SMCHD1-204ENST00000581226 RHOHQ15669 191 aa0.36□□□□□ -2.35
SMCHD1-204ENST00000581226 ZNF56Q15929 161 aa0.36□□□□□ -2.35
SMCHD1-204ENST00000581226 OR8J3Q8NGG0 315 aa0.36□□□□□ -2.35
SMCHD1-204ENST00000581226 SMIM7Q9BQ49 75 aa0.36□□□□□ -2.35
SMCHD1-204ENST00000581226 KIF13AQ9H1H9 1805 aa0.36□□□□□ -2.35
SMCHD1-204ENST00000581226 MAST4O15021 2626 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 FAT4Q6V0I7 4981 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 RBBP6Q7Z6E9 1792 aaKnown RBP0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 TPST1O60507 370 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 ADCYAP1P18509 176 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 PCBD1P61457 104 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 DR1Q01658 176 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 SYNJ1O43426 1573 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 PLXNA1Q9UIW2 1896 aa0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
SMCHD1-204ENST00000581226 CACNA1HO95180 2353 aa0.34□□□□□ -2.35
SMCHD1-204ENST00000581226 A0A0G2JMM0 328 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 CXorf51AA0A1B0GTR3 108 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 HIGD1CA8MV81 97 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 PAEPP09466 180 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 RPL37P61927 97 aaKnown RBP0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 IQCJQ1A5X6 159 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 IDO2Q6ZQW0 420 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 AKAP14Q86UN6 197 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 DMAC1Q96GE9 116 aa0.34□□□□□ -2.36
SMCHD1-204ENST00000581226 PIEZO1Q92508 2521 aa0.33□□□□□ -2.36
SMCHD1-204ENST00000581226 F5P12259 2224 aa0.33□□□□□ -2.36
SMCHD1-204ENST00000581226 KIAA0100Q14667 2235 aaKnown RBP0.33□□□□□ -2.36
SMCHD1-204ENST00000581226 TFF1P04155 84 aa0.33□□□□□ -2.36
SMCHD1-204ENST00000581226 AKR1D1P51857 326 aa0.33□□□□□ -2.36
SMCHD1-204ENST00000581226 PSPHP78330 225 aa0.33□□□□□ -2.36
SMCHD1-204ENST00000581226 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
SMCHD1-204ENST00000581226 OR2H2O95918 312 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 HLA-DRB4P13762 266 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 SPINK7P58062 85 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 LSM3P62310 102 aaKnown RBP0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 MORN2Q502X0 79 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 TCTE3Q8IZS6 198 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 BANF2Q9H503 90 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 PLAC8Q9NZF1 115 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 HLA-DRB4X5D2U9 266 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 PTPRMP28827 1452 aa0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 ZNF142P52746 1687 aaPredicted RBP0.32□□□□□ -2.36
SMCHD1-204ENST00000581226 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms