RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TMEM208Q9BTX3 173 aa7.52□□□□□ -1.21
CCDC47-203ENST00000580986 COL7A1Q02388 2944 aa7.52□□□□□ -1.21
CCDC47-203ENST00000580986 IGHV1OR15-1A0A075B7D0 117 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 CXCL1P09341 107 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 CRIP1P50238 77 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 ZNF80P51504 273 aaPredicted RBP7.51□□□□□ -1.21
CCDC47-203ENST00000580986 RRN3P1Q2M238 152 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 SOHLH1Q5JUK2 328 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 COMMD7Q86VX2 200 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 Q8NAQ8 132 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 RNASE8Q8TDE3 154 aaKnown RBP7.51□□□□□ -1.21
CCDC47-203ENST00000580986 C16orf74Q96GX8 76 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 LINC01587Q99440 93 aa7.51□□□□□ -1.21
CCDC47-203ENST00000580986 MRPL18Q9H0U6 180 aaKnown RBP7.51□□□□□ -1.21
CCDC47-203ENST00000580986 NBEAL2Q6ZNJ1 2754 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 TEX48A0A1B0GUV7 120 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 C19orf71A6NCJ1 209 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 J3KRW8 73 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 SFTA3P0C7M3 94 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 DNLZQ5SXM8 178 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 LINC01551Q86U37 167 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 NAT8Q9UHE5 227 aa7.5□□□□□ -1.21
CCDC47-203ENST00000580986 HUWE1Q7Z6Z7 4374 aaKnown RBP7.5□□□□□ -1.21
CCDC47-203ENST00000580986 TRGV11A0A075B6L2 103 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 TMEM218A2RU14 115 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 SH2D1AO60880 128 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 CEBPGP53567 150 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 PNRC1Q12796 327 aaPredicted RBP7.49□□□□□ -1.21
CCDC47-203ENST00000580986 NDUFA5Q16718 116 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 TMEM241Q24JQ0 296 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 FAM231DQ6ZW35 169 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 NHLRC2Q8NBF2 726 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 IL17DQ8TAD2 202 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 OCC1Q8TAD7 63 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 SDF2L1Q9HCN8 221 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 RETNQ9HD89 108 aa7.49□□□□□ -1.21
CCDC47-203ENST00000580986 IGHV3OR16-12A0A075B7B8 117 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 IGHV4-28A0A0C4DH34 117 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 PLAC8L1A1L4L8 177 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 K7EN84 100 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 TCL1AP56279 114 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 DAZ2Q13117 558 aaKnown RBP7.48□□□□□ -1.21
CCDC47-203ENST00000580986 C11orf72Q8NBR9 251 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 NDUFAF3Q9BU61 184 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 SEC11CQ9BY50 192 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 C11orf21Q9P2W6 132 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 U3KQK5 164 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
CCDC47-203ENST00000580986 IGKV3D-20A0A0C4DH25 116 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 XKRY2A2RUG3 117 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 PGPEP1LA6NFU8 196 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 CBY3A6NI87 242 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 LYRM9A8MSI8 78 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 ZNF705GA8MUZ8 300 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-203ENST00000580986 KRBOX1C9JBD0 128 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 MED14OSP0DP75 135 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 MGST1P10620 155 aaKnown RBP7.47□□□□□ -1.21
CCDC47-203ENST00000580986 RPL23P62829 140 aaKnown RBP7.47□□□□□ -1.21
CCDC47-203ENST00000580986 ZNF415Q09FC8 603 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 CT83Q5H943 113 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 PIK3CD-AS1Q5SR53 167 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 Q6ZQT7 251 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 DAZAP1Q96EP5 407 aaKnown RBP7.47□□□□□ -1.21
CCDC47-203ENST00000580986 SPXQ9BT56 116 aa7.47□□□□□ -1.21
CCDC47-203ENST00000580986 TIMM8BQ9Y5J9 83 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-203ENST00000580986 B4DEV8 164 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 P01737 135 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 ORM1P02763 201 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 TYMSP04818 313 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 AZU1P20160 251 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 RPS20P60866 119 aaKnown RBP7.46□□□□□ -1.22
CCDC47-203ENST00000580986 LGALS9BQ3B8N2 356 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 MUC21Q5SSG8 566 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 C10orf91Q5T1B1 145 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 PRR27Q6MZM9 219 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 ZNF575Q86XF7 245 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 PTH2Q96A98 100 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 ISOC2Q96AB3 205 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 C18orf15Q96N68 181 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 EDA2RQ9HAV5 297 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 OSTCQ9NRP0 149 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 IL36BQ9NZH7 164 aa7.46□□□□□ -1.22
CCDC47-203ENST00000580986 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 FAM231BA6NCW3 169 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 SNURFLB1AK76 121 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 ADCYAP1P18509 176 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 ASIPP42127 132 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 OR5I1Q13606 314 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 LINC00612Q8N6U2 182 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 NUDT10Q8NFP7 164 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 NUDT11Q96G61 164 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 C9orf85Q96MD7 179 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 DKK2Q9UBU2 259 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 NAGKQ9UJ70 344 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 CARHSP1Q9Y2V2 147 aaKnown RBP7.45□□□□□ -1.22
CCDC47-203ENST00000580986 STAB2Q8WWQ8 2551 aa7.45□□□□□ -1.22
CCDC47-203ENST00000580986 A0A0J9YWU9 116 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 F8W036 122 aa7.44□□□□□ -1.22
CCDC47-203ENST00000580986 OR5AL1P0C617 328 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms