RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TXNDC17Q9BRA2 123 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 K7EQD1 137 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 K7EQM0 130 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 DNAH10OSP0CZ25 163 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 PIK3CD-AS1Q5SR53 167 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 MUC21Q5SSG8 566 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 C8orf49Q96NF6 230 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 NDFIP1Q9BT67 221 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 SMIM3Q9BZL3 60 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 TREM1Q9NP99 234 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 TNFSF18Q9UNG2 199 aa9.89□□□□□ -0.83
SMARCE1-216ENST00000580419 SRIP30626 198 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 CDC34P49427 236 aaPredicted RBP9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 GOLT1AQ6ZVE7 132 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 Q8N1X5 172 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 PCNPQ8WW12 178 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 TVP23CQ96ET8 276 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 ZNF479Q96JC4 524 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 HYLS1Q96M11 299 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 TMEM167BQ9NRX6 74 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 LY96Q9Y6Y9 160 aa9.88□□□□□ -0.83
SMARCE1-216ENST00000580419 EREGO14944 169 aa9.87□□□□□ -0.83
SMARCE1-216ENST00000580419 IGHV3-53P01767 116 aa9.87□□□□□ -0.83
SMARCE1-216ENST00000580419 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
SMARCE1-216ENST00000580419 RAB2AP61019 212 aa9.87□□□□□ -0.83
SMARCE1-216ENST00000580419 ALG5Q9Y673 324 aa9.87□□□□□ -0.83
SMARCE1-216ENST00000580419 TAAR5O14804 337 aa9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 TCRAP04437 139 aa9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 GIPP09681 153 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 GATA1P15976 413 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 EVI2AP22794 236 aa9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 ERVFC1-1P60608 527 aa9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 OR4C5Q8NGB2 326 aa9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 RAB24Q969Q5 203 aa9.86□□□□□ -0.83
SMARCE1-216ENST00000580419 TRBV6-4A0A1B0GX49 114 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 A0A1W2PRE2 83 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 CXorf1O96002 111 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 TYMSP04818 313 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 PFN1P07737 140 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 GYPEP15421 78 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 GCHFRP30047 84 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 KRTAP10-2P60368 255 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 SAPCD1Q5SSQ6 148 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 TMEM75Q8N9X5 138 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 NKX6-2Q9C056 277 aaPredicted RBP9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 MED28Q9H204 178 aa9.85□□□□□ -0.83
SMARCE1-216ENST00000580419 TRAV8-1A0A0A6YYK1 113 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 GNRH2O43555 120 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 IGLV2-11P01706 119 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 SFTA3P0C7M3 94 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 ATP6V0CP27449 155 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 ACTR3CQ9C0K3 210 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 SH3BGRL3Q9H299 93 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 EPDR1Q9UM22 224 aa9.84□□□□□ -0.83
SMARCE1-216ENST00000580419 ZFP69Q49AA0 526 aa9.83□□□□□ -0.84
SMARCE1-216ENST00000580419 CYB561D1Q8N8Q1 229 aa9.83□□□□□ -0.84
SMARCE1-216ENST00000580419 C9orf85Q96MD7 179 aa9.83□□□□□ -0.84
SMARCE1-216ENST00000580419 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
SMARCE1-216ENST00000580419 NAGKQ9UJ70 344 aa9.83□□□□□ -0.84
SMARCE1-216ENST00000580419 RS1O15537 224 aa9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 FLI1Q01543 452 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 SMUG1Q53HV7 270 aa9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 COX8CQ7Z4L0 72 aa9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 HSD17B11Q8NBQ5 300 aa9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 INO80EQ8NBZ0 244 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 PSG8Q9UQ74 426 aa9.82□□□□□ -0.84
SMARCE1-216ENST00000580419 BORCS7-ASMTA0A0B4J1R7 106 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 GGTLC3B5MD39 225 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 MGST1P10620 155 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 SUMO1P63165 101 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 GNG5P63218 68 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 RHOHQ15669 191 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 ZFP2Q6ZN57 461 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 TCEAL7Q9BRU2 100 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 PRADC1Q9BSG0 188 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 RPH3ALQ9UNE2 315 aa9.81□□□□□ -0.84
SMARCE1-216ENST00000580419 A0A087WTM6 91 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 IGHV3-38A0A0C4DH36 116 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 F6UZH7 168 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 HMGB3O15347 200 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 GCGP01275 180 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 DNLZQ5SXM8 178 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 HIST1H2BAQ96A08 127 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
SMARCE1-216ENST00000580419 CTXND1A0A1B0GTU2 59 aa9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 RNF222A6NCQ9 220 aa9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 EIF3GO75821 320 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 CRYGDP07320 174 aa9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 PPT1P50897 306 aa9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 LAGE3Q14657 143 aa9.79□□□□□ -0.84
SMARCE1-216ENST00000580419 SLC25A29Q8N8R3 303 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 402.5 ms