RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 C2orf66Q6UXQ4 117 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 NCOA6Q14686 2063 aaPredicted RBP4.12□□□□□ -1.75
NF1-219ENST00000579081 TGFBR3LH3BV60 316 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 RNF126Q9BV68 326 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 PINLYPA6NC86 204 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 B5MCH6 92 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 UBE2AP49459 152 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 MP68P56378 58 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 CR1LQ2VPA4 569 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 YPEL4Q96NS1 127 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 GAFA1Q96PS6 74 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 NDUFA12Q9UI09 145 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 HELZP42694 1942 aaKnown RBP4.12□□□□□ -1.75
NF1-219ENST00000579081 FUSP35637 526 aaKnown RBP eCLIP4.12□□□□□ -1.75
NF1-219ENST00000579081 PRO1854Q9UHT4 67 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 NUP210Q8TEM1 1887 aaPredicted RBP4.12□□□□□ -1.75
NF1-219ENST00000579081 RNASE2P10153 161 aaKnown RBP4.12□□□□□ -1.75
NF1-219ENST00000579081 CFHR2P36980 270 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 CLPSL2Q6UWE3 100 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 Q86TA4 180 aa4.12□□□□□ -1.75
NF1-219ENST00000579081 PNRC2Q9NPJ4 139 aaKnown RBP4.12□□□□□ -1.75
NF1-219ENST00000579081 F8VRH5 84 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 NMSQ5H8A3 153 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 CD177Q8N6Q3 437 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 A0A0J9YY99 117 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 IGKV1-39P01597 117 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 PRB2P02812 416 aaPredicted RBP4.11□□□□□ -1.75
NF1-219ENST00000579081 IGKV1D-39P04432 117 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 FAM222AQ5U5X8 452 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 HCFC1P51610 2035 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 TRBV10-3A0A0K0K1G6 114 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 HERVK_113P63121 156 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 Q8N8P6 123 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 SHANK2-AS3Q9BTD1 123 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 H7C423 109 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 NHLRC4P0CG21 123 aaPredicted RBP4.11□□□□□ -1.75
NF1-219ENST00000579081 LINC01620Q4KN68 170 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 C14orf132Q9NPU4 83 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 FGF6P10767 208 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 A0A0G2JNJ9 132 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 PRB1P04280 392 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 CD164L2Q6UWJ8 174 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 Q9UFV3 132 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 IGHV4-28A0A0C4DH34 117 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 SMIM27A0A1W2PRY6 76 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 F8WDY8 70 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 IGHV1-69P01742 117 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 SRSF3P84103 164 aaKnown RBP4.11□□□□□ -1.75
NF1-219ENST00000579081 PRR14LQ5THK1 2151 aa4.11□□□□□ -1.75
NF1-219ENST00000579081 P0DMU3 169 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 FAM231AP0DMU4 169 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 FAM231CP0DMU5 169 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 CCL18P55774 89 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 MAPK1IP1LQ8NDC0 245 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 FGFBP3Q8TAT2 258 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 FREM1Q5H8C1 2179 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 IGKV1-9A0A0C4DH69 117 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 CENPVL3A0A0U1RRI6 287 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 ATP6V0E1O15342 81 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 RPP25LQ8N5L8 163 aaKnown RBP4.1□□□□□ -1.75
NF1-219ENST00000579081 IGHV4-4A0A075B6R2 117 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 UBE2E1P51965 193 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 ATRAIDQ6UW56 229 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 NBASA2RRP1 2371 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 VWA8A3KMH1 1905 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 PFN1P07737 140 aaKnown RBP4.1□□□□□ -1.75
NF1-219ENST00000579081 FOXE3Q13461 319 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 THADAQ6YHU6 1953 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 IGLV3-12A0A075B6K2 115 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 EFNA2O43921 213 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 NTF4P34130 210 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 Q0VFX4 171 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 ORMDL1Q9P0S3 153 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 EML6Q6ZMW3 1958 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 LYPD2Q6UXB3 125 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 FOXI2Q6ZQN5 318 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 COL11A2P13942 1736 aaPredicted RBP4.1□□□□□ -1.75
NF1-219ENST00000579081 TNCP24821 2201 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 J3QLI3 93 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 IGLV2-23P01705 113 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 Q6ZQT7 251 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 NRACQ8N912 160 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 CAMK2N2Q96S95 79 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 DENND4CQ5VZ89 1909 aa4.1□□□□□ -1.75
NF1-219ENST00000579081 CUL9Q8IWT3 2517 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 NTN3O00634 580 aaPredicted RBP4.09□□□□□ -1.75
NF1-219ENST00000579081 FAM104BQ5XKR9 115 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 FANCD2OSQ96PS1 177 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 OBSL1O75147 1896 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 SHISA3A0PJX4 238 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 XCL1P47992 114 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 TRAV12-2A0A075B6T6 113 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 F6UB75 175 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 LMO1P25800 156 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 FOXL2NBQ6ZUU3 175 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 LINC00311Q8N616 119 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 C8orf49Q96NF6 230 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 FAM110AQ9BQ89 295 aa4.09□□□□□ -1.75
NF1-219ENST00000579081 TSSC4Q9Y5U2 329 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms