RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 LEPP41159 167 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 RPS20P60866 119 aaKnown RBP6.14□□□□□ -1.43
PTPRM-210ENST00000578916 SRPXP78539 464 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 CYP2G1PQ6ZSU1 146 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 NEGR1Q7Z3B1 354 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 LYPD6BQ8NI32 183 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 CIB3Q96Q77 187 aaPredicted RBP6.14□□□□□ -1.43
PTPRM-210ENST00000578916 SLC50A1Q9BRV3 221 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 WFDC1Q9HC57 220 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 SPANXB1Q9NS25 103 aaPredicted RBP6.14□□□□□ -1.43
PTPRM-210ENST00000578916 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
PTPRM-210ENST00000578916 PIGBOS1A0A0B4J2F0 54 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 PRAC2D3DTV9 90 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 H3BS24 57 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 SLC17A3O00476 420 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 PITX3O75364 302 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 CRYGDP07320 174 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 NPSP0C0P6 89 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 LINC00869P0C866 280 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 AKAIN1P0CW23 69 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 DDTP30046 118 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 RPL13AP40429 203 aaKnown RBP6.13□□□□□ -1.43
PTPRM-210ENST00000578916 PKIAP61925 76 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 NCS1P62166 190 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 SNRPEP62304 92 aaKnown RBP6.13□□□□□ -1.43
PTPRM-210ENST00000578916 SSBP1Q04837 148 aaKnown RBP6.13□□□□□ -1.43
PTPRM-210ENST00000578916 ZNF415Q09FC8 603 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 NIT1Q86X76 327 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 WFDC10BQ8IUB3 73 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 C10orf126Q8N4M7 172 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 ZNF431Q8TF32 576 aaPredicted RBP6.13□□□□□ -1.43
PTPRM-210ENST00000578916 ST6GAL2Q96JF0 529 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 C8orf49Q96NF6 230 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 SCGB3A2Q96PL1 93 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 ZNF331Q9NQX6 463 aaPredicted RBP6.13□□□□□ -1.43
PTPRM-210ENST00000578916 HHLA3Q9XRX5 114 aa6.13□□□□□ -1.43
PTPRM-210ENST00000578916 LRCOL1A6NCL2 159 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 H3BTX0 84 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 SPINK4O60575 86 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 OXTP01178 125 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 IFNA1P01562 189 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 C1QBP02746 253 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 TYMSP04818 313 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 SNRPCP09234 159 aaKnown RBP6.12□□□□□ -1.43
PTPRM-210ENST00000578916 CT45A10P0DMU9 189 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 PVALBP20472 110 aaPredicted RBP6.12□□□□□ -1.43
PTPRM-210ENST00000578916 CKS1BP61024 79 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 SPANXN5Q5MJ07 72 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 Q8N814 137 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 C11orf72Q8NBR9 251 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 OR51S1Q8NGJ8 323 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 TMEM37Q8WXS4 190 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 ODF3Q96PU9 254 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 KLF12Q9Y4X4 402 aa6.12□□□□□ -1.43
PTPRM-210ENST00000578916 DUXBA0A1W2PPF3 345 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 IGSF23A1L1A6 192 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 C7orf71A4D174 169 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 E5RGE8 158 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 H3BP45 60 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 K7ERU9 68 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 MRPS12O15235 138 aaKnown RBP6.11□□□□□ -1.43
PTPRM-210ENST00000578916 SYNGR2O43760 224 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 GIPP09681 153 aaPredicted RBP6.11□□□□□ -1.43
PTPRM-210ENST00000578916 SRIP30626 198 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 TCL1AP56279 114 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 SELENOTP62341 195 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 MRPS10P82664 201 aaKnown RBP6.11□□□□□ -1.43
PTPRM-210ENST00000578916 ANXA2RQ3ZCQ2 193 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 ATRAIDQ6UW56 229 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 PCNPQ8WW12 178 aaKnown RBP6.11□□□□□ -1.43
PTPRM-210ENST00000578916 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
PTPRM-210ENST00000578916 ACTR3CQ9C0K3 210 aaPredicted RBP6.11□□□□□ -1.43
PTPRM-210ENST00000578916 SCP2D1Q9UJQ7 156 aa6.11□□□□□ -1.43
PTPRM-210ENST00000578916 TRAV5A0A0B4J249 113 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 TRGV4A0A0C4DH28 118 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 LINC00862A6NCI5 91 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 PTTG1O95997 202 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
PTPRM-210ENST00000578916 SLC25A6P12236 298 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 RRAS2P62070 204 aaPredicted RBP6.1□□□□□ -1.43
PTPRM-210ENST00000578916 FHL2Q14192 279 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 PATE2Q6UY27 113 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 BPIFA4PQ86YQ2 179 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 VGLL1Q99990 258 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 MRPL16Q9NX20 251 aaKnown RBP6.1□□□□□ -1.43
PTPRM-210ENST00000578916 RCL1Q9Y2P8 373 aaKnown RBP6.1□□□□□ -1.43
PTPRM-210ENST00000578916 PXMP4Q9Y6I8 212 aa6.1□□□□□ -1.43
PTPRM-210ENST00000578916 K7EQD1 137 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 VCYO14598 125 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 MPDU1O75352 247 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 SULT1A1P50225 295 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 SULT1A2P50226 295 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 TAL2Q16559 108 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 LINC00305Q7Z4B0 112 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 LRTM2Q8N967 370 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 SMIM4Q8WVI0 70 aa6.09□□□□□ -1.43
PTPRM-210ENST00000578916 BTF3L4Q96K17 158 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms