RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, human

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBB-208	ENST00000578706		A0A087X0K7	114 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	PCP4L1	A6NKN8	68 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	SNURFL	B1AK76	121 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	DIRC3	C9JPN6	131 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	NPIPB6	E9PJ23	425 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	SPRY2	O43597	315 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	IGLV2-11	P01706	119 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706		P01737	135 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	IGHV3-23	P01764	117 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	CLEC3B	P05452	202 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	SNRPC	P09234	159 aa	Known RBP	4.62	□□□□□ -1.67
UBB-208	ENST00000578706	FABP4	P15090	132 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	CRISP2	P16562	243 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	CBLN1	P23435	193 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	GPR183	P32249	361 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706		Q0VG73	95 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	PSG3	Q16557	428 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	DEFB114	Q30KQ6	69 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	FAM209B	Q5JX69	171 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	GFI1B	Q5VTD9	330 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	PRR27	Q6MZM9	219 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	TOMM20L	Q6UXN7	152 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	TMEM136	Q6ZRR5	245 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706		Q6ZWC4	215 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	EXOC3-AS1	Q8N2X6	119 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	OR10D4P	Q8NGN7	298 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	TMEM18	Q96B42	140 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	USMG5	Q96IX5	58 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	PACRG	Q96M98	296 aa	Predicted RBP	4.62	□□□□□ -1.67
UBB-208	ENST00000578706	CCDC140	Q96MF4	163 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	NIT2	Q9NQR4	276 aa		4.62	□□□□□ -1.67
UBB-208	ENST00000578706	AMBP	P02760	352 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	RBMY1A1	P0DJD3	496 aa	Known RBP	4.61	□□□□□ -1.67
UBB-208	ENST00000578706	ESD	P10768	282 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	APOC4	P55056	127 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	TCL1A	P56279	114 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	TCTA	P57738	103 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	TNP2	Q05952	138 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	PDZD11	Q5EBL8	140 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	SAPCD1	Q5SSQ6	148 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	C16orf54	Q6UWD8	224 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	CLEC19A	Q6UXS0	136 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	COX8C	Q7Z4L0	72 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	PRNT	Q86SH4	94 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	GBGT1	Q8N5D6	347 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	NUP35	Q8NFH5	326 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	RNF183	Q96D59	192 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	C17orf77	Q96MU5	243 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	METTL26	Q96S19	204 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	NEU1	Q99519	415 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	SLC50A1	Q9BRV3	221 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	CLEC5A	Q9NY25	188 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	PSG8	Q9UQ74	426 aa		4.61	□□□□□ -1.67
UBB-208	ENST00000578706	TRAV8-1	A0A0A6YYK1	113 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706		A0A1B0GXF2	115 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	RBAKDN	A6NC62	111 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	HIGD1C	A8MV81	97 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	BUB3	O43684	328 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	CA1	P00915	261 aa	Predicted RBP	4.6	□□□□□ -1.67
UBB-208	ENST00000578706	TRBV12-3	P01733	135 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	APCS	P02743	223 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	CT45A10	P0DMU9	189 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	RAB4B	P61018	213 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	PAFAH1B2	P68402	229 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	HBB	P68871	147 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	JOSD1	Q15040	202 aa	Predicted RBP	4.6	□□□□□ -1.67
UBB-208	ENST00000578706	PYY3	Q5JQD4	70 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	OR10J3	Q5JRS4	329 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706		Q6AWC8	147 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	MRPL54	Q6P161	138 aa	Known RBP	4.6	□□□□□ -1.67
UBB-208	ENST00000578706	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.6	□□□□□ -1.67
UBB-208	ENST00000578706	MRPL53	Q96EL3	112 aa	Known RBP	4.6	□□□□□ -1.67
UBB-208	ENST00000578706	SGK494	Q96LW2	274 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706		U3KQE9	123 aa		4.6	□□□□□ -1.67
UBB-208	ENST00000578706	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.59	□□□□□ -1.67
UBB-208	ENST00000578706		A0A1B0GW15	77 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706		M0R3E3	92 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	NDUFA4	O00483	81 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	CHEK1	O14757	476 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	SPINK4	O60575	86 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	ARL3	P36405	182 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	FOXA3	P55318	350 aa	Predicted RBP	4.59	□□□□□ -1.67
UBB-208	ENST00000578706	DEFB135	Q30KP9	77 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	FAM162B	Q5T6X4	162 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	VPS13B	Q7Z7G8	4022 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	BAGE3	Q86Y29	109 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	OR2D3	Q8NGH3	330 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	C11orf45	Q8TAV5	145 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	ZC2HC1A	Q96GY0	325 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	NDFIP1	Q9BT67	221 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	APLN	Q9ULZ1	77 aa		4.59	□□□□□ -1.67
UBB-208	ENST00000578706	RNF213	Q63HN8	5207 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	IGHV3-35	A0A0C4DH35	117 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	GRIFIN	A4D1Z8	144 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	C2orf70	A6NJV1	201 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706		A8MWP6	167 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	NANOS2	P60321	138 aa	Known RBP	4.58	□□□□□ -1.68
UBB-208	ENST00000578706	RPS20	P60866	119 aa	Known RBP	4.58	□□□□□ -1.68
UBB-208	ENST00000578706	RIG	Q13278	110 aa		4.58	□□□□□ -1.68
UBB-208	ENST00000578706	ZNF124	Q15973	351 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms