RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SGK494Q96LW2 274 aa10.86□□□□□ -0.67
CRLF3-203ENST00000578692 RYR1P21817 5038 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 TRAV4A0A0B4J268 109 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 SERTM2A0A1B0GWG4 89 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 MBP02144 154 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 ORM1P02763 201 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 TYMSP04818 313 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 SRIP30626 198 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 Q5BKY6 102 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 OR4C5Q8NGB2 326 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 SUN5Q8TC36 379 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 PCNPQ8WW12 178 aaKnown RBP10.85□□□□□ -0.67
CRLF3-203ENST00000578692 NDFIP1Q9BT67 221 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 SDF2L1Q9HCN8 221 aa10.85□□□□□ -0.67
CRLF3-203ENST00000578692 TCRAP04437 139 aa10.84□□□□□ -0.67
CRLF3-203ENST00000578692 GYPEP15421 78 aa10.84□□□□□ -0.67
CRLF3-203ENST00000578692 GCHFRP30047 84 aa10.84□□□□□ -0.67
CRLF3-203ENST00000578692 Q6ZRN7 208 aaPredicted RBP10.84□□□□□ -0.67
CRLF3-203ENST00000578692 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
CRLF3-203ENST00000578692 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
CRLF3-203ENST00000578692 K7EQM0 130 aa10.83□□□□□ -0.68
CRLF3-203ENST00000578692 KRTAP10-2P60368 255 aa10.83□□□□□ -0.68
CRLF3-203ENST00000578692 SUMO1P63165 101 aaKnown RBP10.83□□□□□ -0.68
CRLF3-203ENST00000578692 ASB13Q8WXK3 278 aa10.83□□□□□ -0.68
CRLF3-203ENST00000578692 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
CRLF3-203ENST00000578692 TNFSF18Q9UNG2 199 aa10.83□□□□□ -0.68
CRLF3-203ENST00000578692 C9JCJ5 164 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 CXorf1O96002 111 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 GIPP09681 153 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-203ENST00000578692 INO80EQ8NBZ0 244 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-203ENST00000578692 TXNDC17Q9BRA2 123 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 ACTR3CQ9C0K3 210 aaPredicted RBP10.82□□□□□ -0.68
CRLF3-203ENST00000578692 SH3BGRL3Q9H299 93 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 TMEM167BQ9NRX6 74 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 EPDR1Q9UM22 224 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 PSG8Q9UQ74 426 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 TNFRSF18Q9Y5U5 241 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 LY96Q9Y6Y9 160 aa10.82□□□□□ -0.68
CRLF3-203ENST00000578692 LRP1BQ9NZR2 4599 aa10.81□□□□□ -0.68
CRLF3-203ENST00000578692 TAAR5O14804 337 aa10.81□□□□□ -0.68
CRLF3-203ENST00000578692 ZNF80P51504 273 aaPredicted RBP10.81□□□□□ -0.68
CRLF3-203ENST00000578692 HSPG2P98160 4391 aa10.8□□□□□ -0.68
CRLF3-203ENST00000578692 GCGP01275 180 aa10.8□□□□□ -0.68
CRLF3-203ENST00000578692 FLI1Q01543 452 aaPredicted RBP10.8□□□□□ -0.68
CRLF3-203ENST00000578692 NFE4Q86UQ8 179 aa10.8□□□□□ -0.68
CRLF3-203ENST00000578692 WFDC10BQ8IUB3 73 aa10.8□□□□□ -0.68
CRLF3-203ENST00000578692 MAPKAPK5-AS1Q8N8E1 139 aa10.8□□□□□ -0.68
CRLF3-203ENST00000578692 C11orf21Q9P2W6 132 aa10.8□□□□□ -0.68
CRLF3-203ENST00000578692 BORCS7-ASMTA0A0B4J1R7 106 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 GGTLC3B5MD39 225 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 K7EP13 123 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 IGLV2-11P01706 119 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 ZNF876PQ49A33 203 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 SMUG1Q53HV7 270 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 RPL7L1Q6DKI1 246 aaKnown RBP10.79□□□□□ -0.68
CRLF3-203ENST00000578692 PRNTQ86SH4 94 aa10.79□□□□□ -0.68
CRLF3-203ENST00000578692 FXYD6-FXYD2A0A087WZ82 144 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 RNF222A6NCQ9 220 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 EREGO14944 169 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 PFN1P07737 140 aaKnown RBP10.78□□□□□ -0.68
CRLF3-203ENST00000578692 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
CRLF3-203ENST00000578692 EVI2AP22794 236 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 CYB561D1Q8N8Q1 229 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 TMEM75Q8N9X5 138 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 BOLA1Q9Y3E2 137 aa10.78□□□□□ -0.68
CRLF3-203ENST00000578692 A0A1W2PRE2 83 aa10.77□□□□□ -0.68
CRLF3-203ENST00000578692 FBLL1A6NHQ2 334 aaKnown RBP10.77□□□□□ -0.68
CRLF3-203ENST00000578692 CIDEAO60543 219 aa10.77□□□□□ -0.68
CRLF3-203ENST00000578692 ERVFC1-1P60608 527 aa10.77□□□□□ -0.68
CRLF3-203ENST00000578692 NHLRC2Q8NBF2 726 aa10.77□□□□□ -0.68
CRLF3-203ENST00000578692 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.68
CRLF3-203ENST00000578692 RS1O15537 224 aa10.77□□□□□ -0.69
CRLF3-203ENST00000578692 DNAH10OSP0CZ25 163 aa10.77□□□□□ -0.69
CRLF3-203ENST00000578692 CFAP126Q5VTH2 177 aa10.77□□□□□ -0.69
CRLF3-203ENST00000578692 DPPA3Q6W0C5 159 aa10.77□□□□□ -0.69
CRLF3-203ENST00000578692 OR2T35Q8NGX2 323 aa10.77□□□□□ -0.69
CRLF3-203ENST00000578692 C9orf85Q96MD7 179 aa10.77□□□□□ -0.69
CRLF3-203ENST00000578692 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.69
CRLF3-203ENST00000578692 CTXND1A0A1B0GTU2 59 aa10.76□□□□□ -0.69
CRLF3-203ENST00000578692 PGPEP1LA6NFU8 196 aa10.76□□□□□ -0.69
CRLF3-203ENST00000578692 ZNF726P1Q15940 193 aa10.76□□□□□ -0.69
CRLF3-203ENST00000578692 SLC25A29Q8N8R3 303 aa10.76□□□□□ -0.69
CRLF3-203ENST00000578692 LINC00479Q96M42 142 aa10.76□□□□□ -0.69
CRLF3-203ENST00000578692 PRADC1Q9BSG0 188 aa10.76□□□□□ -0.69
CRLF3-203ENST00000578692 TRAV34A0A0B4J273 112 aa10.75□□□□□ -0.69
CRLF3-203ENST00000578692 IFNA7P01567 189 aa10.75□□□□□ -0.69
CRLF3-203ENST00000578692 RNASE3P12724 160 aaKnown RBP10.75□□□□□ -0.69
CRLF3-203ENST00000578692 TIRAPP58753 221 aa10.75□□□□□ -0.69
CRLF3-203ENST00000578692 Q8N1X5 172 aa10.75□□□□□ -0.69
CRLF3-203ENST00000578692 PTH2Q96A98 100 aa10.75□□□□□ -0.69
CRLF3-203ENST00000578692 IGHV3-73A0A0B4J1V6 119 aa10.74□□□□□ -0.69
CRLF3-203ENST00000578692 TRBV6-4A0A1B0GX49 114 aa10.74□□□□□ -0.69
CRLF3-203ENST00000578692 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
CRLF3-203ENST00000578692 CRYGDP07320 174 aa10.74□□□□□ -0.69
CRLF3-203ENST00000578692 PPT1P50897 306 aa10.74□□□□□ -0.69
CRLF3-203ENST00000578692 UBE2G2P60604 165 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms