RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 ST20-AS1Q8NBB2 130 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 PRELID3AQ96N28 172 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 SDF2Q99470 211 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 MIEN1Q9BRT3 115 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 NPCDR1Q9BY65 106 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 C16orf95Q9H693 158 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 SCN3BQ9NY72 215 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 BOKQ9UMX3 212 aaPredicted RBP2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 CSMD1Q96PZ7 3565 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 NUMA1Q14980 2115 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 PLXNA2O75051 1894 aa2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 COL5A1P20908 1838 aaPredicted RBP2.75□□□□□ -1.97
GAPLINC-201ENST00000578664 AKAP9Q99996 3911 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 DSCAML1Q8TD84 2053 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 IGHV3-73A0A0B4J1V6 119 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 A0A0G2JND7 137 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 HCRTO43612 131 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 COX6A1P12074 109 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 HIST1H1DP16402 221 aaKnown RBP2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 FUSP35637 526 aaKnown RBP eCLIP2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 FOXA3P55318 350 aaPredicted RBP2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 ZNF816Q0VGE8 651 aaPredicted RBP2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 HES1Q14469 280 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 KISS1Q15726 138 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 CCSMST1Q4G0I0 132 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 C14orf177Q52M58 125 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 LDLRAD2Q5SZI1 272 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 ZNF660Q6AZW8 331 aaPredicted RBP2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 LCN15Q6UWW0 184 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 C2orf91Q6ZV80 131 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 BPIFA4PQ86YQ2 179 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 CYB561D1Q8N8Q1 229 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 OR5H6Q8NGV6 325 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 DIRC1Q969H9 104 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 OR4C12Q96R67 309 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 RERGLQ9H628 205 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 MPC1Q9Y5U8 109 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 PTPRQQ9UMZ3 2332 aa2.74□□□□□ -1.97
GAPLINC-201ENST00000578664 ZFHX3Q15911 3703 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 SCN2AQ99250 2005 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 FAM236AA0A1B0GUQ0 79 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 LOC100130705A0A1B0GUX0 176 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 FAM236BA0A1B0GV22 79 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 SMIM31A0A1B0GVY4 71 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 TMEM235A6NFC5 223 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 K7ERJ3 54 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 CDC42EP2O14613 210 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 ZNF861PO60384 105 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 IGHV3-53P01767 116 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 TCRAP04437 139 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 ZNF883P0CG24 379 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 AKAIN1P0CW23 69 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 HLA-DRB4P13762 266 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 CDK6Q00534 326 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 EIF5AL1Q6IS14 154 aaKnown RBP2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 PATE2Q6UY27 113 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 Q6ZR54 194 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 LINC00299Q6ZSB3 139 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 ARPINQ7Z6K5 226 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 GTSCR1Q86UQ5 136 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 TEN1Q86WV5 123 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 SAXO1Q8IYX7 474 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 OR10P1Q8NGE3 313 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 OR4B1Q8NGF8 309 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 OR5D14Q8NGL3 314 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 LINC00467Q9BRT7 94 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 KRTAP1-5Q9BYS1 174 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 Q9H521 79 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 ZNF443Q9Y2A4 671 aaPredicted RBP2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 HLA-DRB4X5D2U9 266 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 COL6A6A6NMZ7 2263 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 TDRD6O60522 2096 aaKnown RBP2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 ITPR2Q14571 2701 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 HCFC1P51610 2035 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 CSMD2Q7Z408 3487 aa2.73□□□□□ -1.97
GAPLINC-201ENST00000578664 DCHS2Q6V1P9 2916 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 CENPEQ02224 2701 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 IGLV4-69A0A075B6H9 119 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 IGKV3D-15A0A087WSY6 115 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 TRAV30A0A087WSZ9 112 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 TMEM218A2RU14 115 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 PANO1I0J062 215 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 M0R143 59 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 SDCBPO00560 298 aaPredicted RBP2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 TACC2O95359 2948 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 IGKV3-20P01619 116 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 COL8A2P25067 703 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 TMEM258P61165 79 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 ZNF117Q03924 483 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 KRTAP1-1Q07627 177 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 ATOH7Q8N100 152 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 Q8NDZ9 215 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 KLF14Q8TD94 323 aaPredicted RBP2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 DEDD2Q8WXF8 326 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 GINS4Q9BRT9 223 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 SPANXDQ9BXN6 97 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 KIF26BQ2KJY2 2108 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 PIKFYVEQ9Y2I7 2098 aa2.72□□□□□ -1.97
GAPLINC-201ENST00000578664 UNC79Q9P2D8 2635 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms