RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 PPT1P50897 306 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 FLI1Q01543 452 aaPredicted RBP11.24□□□□□ -0.61
VAPA-204ENST00000577901 MUC21Q5SSG8 566 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 TMEM88Q6PEY1 159 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 LINC00612Q8N6U2 182 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 TMEM75Q8N9X5 138 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 SFT2D1Q8WV19 159 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 TVP23CQ96ET8 276 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
VAPA-204ENST00000577901 FAM74A7A6NL05 159 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 TCL1AP56279 114 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 ZNF415Q09FC8 603 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 PRNTQ86SH4 94 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 MBD3L1Q8WWY6 194 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 LRP1BQ9NZR2 4599 aa11.23□□□□□ -0.61
VAPA-204ENST00000577901 F6UZH7 168 aa11.22□□□□□ -0.61
VAPA-204ENST00000577901 ZFP69Q49AA0 526 aa11.22□□□□□ -0.61
VAPA-204ENST00000577901 Q6ZTI0 123 aa11.22□□□□□ -0.61
VAPA-204ENST00000577901 C15orf53Q8NAA6 179 aa11.22□□□□□ -0.61
VAPA-204ENST00000577901 NAGKQ9UJ70 344 aa11.22□□□□□ -0.61
VAPA-204ENST00000577901 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 PEX7O00628 323 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 SPINK4O60575 86 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 IGLV2-11P01706 119 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 H2AFB1P0C5Y9 115 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 RAB5CP51148 216 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 SMUG1Q53HV7 270 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 CST9LP1Q5W188 147 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.61
VAPA-204ENST00000577901 MUC4Q99102 2169 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
VAPA-204ENST00000577901 OR5I1Q13606 314 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 TMEM183BQ1AE95 376 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 TDRG1Q3Y452 100 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 SLC51BQ86UW2 128 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 KCNS1Q96KK3 526 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 LINC00479Q96M42 142 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 C18orf15Q96N68 181 aa11.2□□□□□ -0.62
VAPA-204ENST00000577901 GCGP01275 180 aa11.19□□□□□ -0.62
VAPA-204ENST00000577901 C8orf49Q96NF6 230 aa11.19□□□□□ -0.62
VAPA-204ENST00000577901 SPXQ9BT56 116 aa11.19□□□□□ -0.62
VAPA-204ENST00000577901 SDF2L1Q9HCN8 221 aa11.19□□□□□ -0.62
VAPA-204ENST00000577901 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
VAPA-204ENST00000577901 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
VAPA-204ENST00000577901 A0A1B0GV50 99 aa11.18□□□□□ -0.62
VAPA-204ENST00000577901 TEX46H3BTG2 121 aa11.18□□□□□ -0.62
VAPA-204ENST00000577901 PAGE4O60829 102 aa11.18□□□□□ -0.62
VAPA-204ENST00000577901 NACAE9PAV3 2078 aa11.17□□□□□ -0.62
VAPA-204ENST00000577901 C16orf90A8MZG2 172 aa11.17□□□□□ -0.62
VAPA-204ENST00000577901 GNRH2O43555 120 aa11.17□□□□□ -0.62
VAPA-204ENST00000577901 NUDT3O95989 172 aa11.17□□□□□ -0.62
VAPA-204ENST00000577901 PFN1P07737 140 aaKnown RBP11.17□□□□□ -0.62
VAPA-204ENST00000577901 ZNF80P51504 273 aaPredicted RBP11.17□□□□□ -0.62
VAPA-204ENST00000577901 UBE2G1P62253 170 aa11.17□□□□□ -0.62
VAPA-204ENST00000577901 TNP2Q05952 138 aa11.17□□□□□ -0.62
VAPA-204ENST00000577901 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
VAPA-204ENST00000577901 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
VAPA-204ENST00000577901 APOBP04114 4563 aaKnown RBP11.16□□□□□ -0.62
VAPA-204ENST00000577901 TRAV26-1A0A087WT03 109 aa11.16□□□□□ -0.62
VAPA-204ENST00000577901 LOC100996750A0A140TA64 210 aa11.16□□□□□ -0.62
VAPA-204ENST00000577901 HOXA5P20719 270 aa11.16□□□□□ -0.62
VAPA-204ENST00000577901 SULT1A2P50226 295 aa11.16□□□□□ -0.62
VAPA-204ENST00000577901 KRTAP4-6Q9BYQ5 205 aa11.16□□□□□ -0.62
VAPA-204ENST00000577901 ZFP30Q9Y2G7 519 aa11.16□□□□□ -0.62
VAPA-204ENST00000577901 DNAH5Q8TE73 4624 aa11.16□□□□□ -0.62
VAPA-204ENST00000577901 IGHV3-16A0A0C4DH30 117 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 FABP5P3A8MUU1 101 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 TYMSP04818 313 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 Q86TA4 180 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 C9orf62Q8N4C0 152 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 ZNRF2Q8NHG8 242 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 RASL10AQ92737 203 aa11.15□□□□□ -0.62
VAPA-204ENST00000577901 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
VAPA-204ENST00000577901 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
VAPA-204ENST00000577901 H3BNG1 76 aa11.14□□□□□ -0.63
VAPA-204ENST00000577901 M0R2P5 195 aa11.14□□□□□ -0.63
VAPA-204ENST00000577901 CDK2AP2O75956 126 aa11.14□□□□□ -0.63
VAPA-204ENST00000577901 S100A9P06702 114 aaKnown RBP11.14□□□□□ -0.63
VAPA-204ENST00000577901 AKR1C3P42330 323 aa11.14□□□□□ -0.63
VAPA-204ENST00000577901 C6orf223Q8N319 242 aa11.14□□□□□ -0.63
VAPA-204ENST00000577901 A0A0J9YY99 117 aa11.13□□□□□ -0.63
VAPA-204ENST00000577901 SLAQ13239 276 aa11.13□□□□□ -0.63
VAPA-204ENST00000577901 MAPKAPK5-AS1Q8N8E1 139 aa11.13□□□□□ -0.63
VAPA-204ENST00000577901 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
VAPA-204ENST00000577901 A0A1B0GVG6 124 aa11.12□□□□□ -0.63
VAPA-204ENST00000577901 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
VAPA-204ENST00000577901 CCL18P55774 89 aa11.12□□□□□ -0.63
VAPA-204ENST00000577901 CCL20P78556 96 aa11.12□□□□□ -0.63
VAPA-204ENST00000577901 COX8CQ7Z4L0 72 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms